Protein–RNA interactions for Protein: Q86YS6

RAB43, Ras-related protein Rab-43, humanhuman

Predictions only

Length 212 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB43Q86YS6 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC21.18■□□□□ 0.98
RAB43Q86YS6 CA15P2-201ENST00000611168 834 ntBASIC21.18■□□□□ 0.98
RAB43Q86YS6 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
RAB43Q86YS6 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
RAB43Q86YS6 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RAB43Q86YS6 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RAB43Q86YS6 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RAB43Q86YS6 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RAB43Q86YS6 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC21.17■□□□□ 0.98
RAB43Q86YS6 AC136469.2-201ENST00000623944 1028 ntBASIC21.17■□□□□ 0.98
RAB43Q86YS6 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RAB43Q86YS6 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RAB43Q86YS6 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RAB43Q86YS6 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RAB43Q86YS6 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RAB43Q86YS6 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RAB43Q86YS6 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
RAB43Q86YS6 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
RAB43Q86YS6 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RAB43Q86YS6 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RAB43Q86YS6 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
RAB43Q86YS6 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC21.16■□□□□ 0.98
RAB43Q86YS6 ALDH1A3-203ENST00000557963 1670 ntBASIC21.16■□□□□ 0.98
RAB43Q86YS6 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC21.16■□□□□ 0.98
RAB43Q86YS6 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
RAB43Q86YS6 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC21.16■□□□□ 0.98
RAB43Q86YS6 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
RAB43Q86YS6 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC21.16■□□□□ 0.98
RAB43Q86YS6 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
RAB43Q86YS6 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RAB43Q86YS6 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RAB43Q86YS6 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RAB43Q86YS6 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RAB43Q86YS6 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC21.15■□□□□ 0.98
RAB43Q86YS6 AC008764.7-201ENST00000593779 1081 ntBASIC21.15■□□□□ 0.98
RAB43Q86YS6 NKILA-201ENST00000613231 537 ntTSL 4 BASIC21.15■□□□□ 0.98
RAB43Q86YS6 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
RAB43Q86YS6 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RAB43Q86YS6 AC138932.3-201ENST00000567634 1902 ntBASIC21.15■□□□□ 0.98
RAB43Q86YS6 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
RAB43Q86YS6 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC21.15■□□□□ 0.98
RAB43Q86YS6 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
RAB43Q86YS6 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
RAB43Q86YS6 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RAB43Q86YS6 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RAB43Q86YS6 RBM38-205ENST00000440234 686 ntTSL 2 BASIC21.14■□□□□ 0.97
RAB43Q86YS6 MAG-206ENST00000597035 542 ntTSL 4 BASIC21.14■□□□□ 0.97
RAB43Q86YS6 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RAB43Q86YS6 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RAB43Q86YS6 USF2-207ENST00000595068 1612 ntTSL 5 BASIC21.14■□□□□ 0.97
RAB43Q86YS6 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RAB43Q86YS6 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RAB43Q86YS6 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
RAB43Q86YS6 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC21.14■□□□□ 0.97
RAB43Q86YS6 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RAB43Q86YS6 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
RAB43Q86YS6 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
RAB43Q86YS6 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
RAB43Q86YS6 AC006455.2-201ENST00000429931 906 ntBASIC21.13■□□□□ 0.97
RAB43Q86YS6 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC21.13■□□□□ 0.97
RAB43Q86YS6 MIR5787-201ENST00000611784 55 ntBASIC21.13■□□□□ 0.97
RAB43Q86YS6 VGF-203ENST00000611537 1622 ntTSL 5 BASIC21.13■□□□□ 0.97
RAB43Q86YS6 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RAB43Q86YS6 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
RAB43Q86YS6 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RAB43Q86YS6 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
RAB43Q86YS6 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC21.12■□□□□ 0.97
RAB43Q86YS6 AP003733.4-201ENST00000623785 1697 ntBASIC21.12■□□□□ 0.97
RAB43Q86YS6 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
RAB43Q86YS6 AC099791.1-201ENST00000416440 715 ntBASIC21.12■□□□□ 0.97
RAB43Q86YS6 STOX2-205ENST00000513034 807 ntTSL 3 BASIC21.12■□□□□ 0.97
RAB43Q86YS6 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC21.12■□□□□ 0.97
RAB43Q86YS6 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RAB43Q86YS6 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
RAB43Q86YS6 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RAB43Q86YS6 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC21.12■□□□□ 0.97
RAB43Q86YS6 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC21.11■□□□□ 0.97
RAB43Q86YS6 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
RAB43Q86YS6 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC21.11■□□□□ 0.97
RAB43Q86YS6 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
RAB43Q86YS6 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
RAB43Q86YS6 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
RAB43Q86YS6 AC026271.2-201ENST00000428091 497 ntBASIC21.11■□□□□ 0.97
RAB43Q86YS6 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
RAB43Q86YS6 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
RAB43Q86YS6 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC21.11■□□□□ 0.97
RAB43Q86YS6 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RAB43Q86YS6 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
RAB43Q86YS6 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC21.11■□□□□ 0.97
RAB43Q86YS6 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
RAB43Q86YS6 MIR3181-201ENST00000578512 73 ntBASIC21.1■□□□□ 0.97
RAB43Q86YS6 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
RAB43Q86YS6 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RAB43Q86YS6 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC21.1■□□□□ 0.97
RAB43Q86YS6 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RAB43Q86YS6 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
RAB43Q86YS6 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RAB43Q86YS6 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
RAB43Q86YS6 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC21.09■□□□□ 0.97
RAB43Q86YS6 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms