Protein–RNA interactions for Protein: Q86YD7

FAM90A1, Protein FAM90A1, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM90A1Q86YD7 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
FAM90A1Q86YD7 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC18.78■□□□□ 0.6
FAM90A1Q86YD7 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC18.78■□□□□ 0.6
FAM90A1Q86YD7 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC18.78■□□□□ 0.6
FAM90A1Q86YD7 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
FAM90A1Q86YD7 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC18.78■□□□□ 0.6
FAM90A1Q86YD7 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
FAM90A1Q86YD7 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
FAM90A1Q86YD7 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
FAM90A1Q86YD7 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
FAM90A1Q86YD7 VGF-203ENST00000611537 1622 ntTSL 5 BASIC18.77■□□□□ 0.6
FAM90A1Q86YD7 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
FAM90A1Q86YD7 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
FAM90A1Q86YD7 AL353803.4-201ENST00000565882 1934 ntBASIC18.76■□□□□ 0.59
FAM90A1Q86YD7 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
FAM90A1Q86YD7 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC18.76■□□□□ 0.59
FAM90A1Q86YD7 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
FAM90A1Q86YD7 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
FAM90A1Q86YD7 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
FAM90A1Q86YD7 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
FAM90A1Q86YD7 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC18.76■□□□□ 0.59
FAM90A1Q86YD7 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
FAM90A1Q86YD7 DUX4L4-201ENST00000566884 1269 ntBASIC18.76■□□□□ 0.59
FAM90A1Q86YD7 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
FAM90A1Q86YD7 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
FAM90A1Q86YD7 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
FAM90A1Q86YD7 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
FAM90A1Q86YD7 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
FAM90A1Q86YD7 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
FAM90A1Q86YD7 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC18.75■□□□□ 0.59
FAM90A1Q86YD7 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
FAM90A1Q86YD7 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC18.75■□□□□ 0.59
FAM90A1Q86YD7 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
FAM90A1Q86YD7 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
FAM90A1Q86YD7 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC18.75■□□□□ 0.59
FAM90A1Q86YD7 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
FAM90A1Q86YD7 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
FAM90A1Q86YD7 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
FAM90A1Q86YD7 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
FAM90A1Q86YD7 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
FAM90A1Q86YD7 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
FAM90A1Q86YD7 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
FAM90A1Q86YD7 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC18.74■□□□□ 0.59
FAM90A1Q86YD7 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC18.74■□□□□ 0.59
FAM90A1Q86YD7 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC18.74■□□□□ 0.59
FAM90A1Q86YD7 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC18.74■□□□□ 0.59
FAM90A1Q86YD7 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
FAM90A1Q86YD7 PEMT-206ENST00000435340 960 ntTSL 5 BASIC18.74■□□□□ 0.59
FAM90A1Q86YD7 AC241377.3-202ENST00000626088 1088 ntBASIC18.74■□□□□ 0.59
FAM90A1Q86YD7 AC241585.3-202ENST00000628937 1088 ntBASIC18.74■□□□□ 0.59
FAM90A1Q86YD7 AC245100.8-202ENST00000629247 1058 ntBASIC18.74■□□□□ 0.59
FAM90A1Q86YD7 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
FAM90A1Q86YD7 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
FAM90A1Q86YD7 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
FAM90A1Q86YD7 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
FAM90A1Q86YD7 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
FAM90A1Q86YD7 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
FAM90A1Q86YD7 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
FAM90A1Q86YD7 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC18.73■□□□□ 0.59
FAM90A1Q86YD7 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
FAM90A1Q86YD7 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC18.73■□□□□ 0.59
FAM90A1Q86YD7 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
FAM90A1Q86YD7 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC18.73■□□□□ 0.59
FAM90A1Q86YD7 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
FAM90A1Q86YD7 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
FAM90A1Q86YD7 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC18.73■□□□□ 0.59
FAM90A1Q86YD7 AC099791.2-201ENST00000605725 427 ntBASIC18.73■□□□□ 0.59
FAM90A1Q86YD7 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
FAM90A1Q86YD7 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
FAM90A1Q86YD7 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
FAM90A1Q86YD7 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
FAM90A1Q86YD7 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
FAM90A1Q86YD7 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
FAM90A1Q86YD7 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC18.72■□□□□ 0.59
FAM90A1Q86YD7 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC18.72■□□□□ 0.59
FAM90A1Q86YD7 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
FAM90A1Q86YD7 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
FAM90A1Q86YD7 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC18.72■□□□□ 0.59
FAM90A1Q86YD7 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC18.72■□□□□ 0.59
FAM90A1Q86YD7 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
FAM90A1Q86YD7 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC18.72■□□□□ 0.59
FAM90A1Q86YD7 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
FAM90A1Q86YD7 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
FAM90A1Q86YD7 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
FAM90A1Q86YD7 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC18.72■□□□□ 0.59
FAM90A1Q86YD7 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
FAM90A1Q86YD7 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
FAM90A1Q86YD7 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
FAM90A1Q86YD7 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
FAM90A1Q86YD7 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC18.71■□□□□ 0.59
FAM90A1Q86YD7 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC18.71■□□□□ 0.59
FAM90A1Q86YD7 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC18.71■□□□□ 0.59
FAM90A1Q86YD7 AC009086.3-201ENST00000623486 1008 ntBASIC18.71■□□□□ 0.59
FAM90A1Q86YD7 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC18.71■□□□□ 0.59
FAM90A1Q86YD7 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC18.71■□□□□ 0.59
FAM90A1Q86YD7 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
FAM90A1Q86YD7 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
FAM90A1Q86YD7 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
FAM90A1Q86YD7 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC18.71■□□□□ 0.59
FAM90A1Q86YD7 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC18.7■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 14 ms