Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
SHFQ7M4L6 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SHFQ7M4L6 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SHFQ7M4L6 IDNK-201ENST00000376417 511 ntTSL 5 BASIC20.1■□□□□ 0.81
SHFQ7M4L6 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SHFQ7M4L6 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SHFQ7M4L6 LBH-205ENST00000407930 756 ntTSL 2 BASIC20.1■□□□□ 0.81
SHFQ7M4L6 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC20.1■□□□□ 0.81
SHFQ7M4L6 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC20.1■□□□□ 0.81
SHFQ7M4L6 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC20.1■□□□□ 0.81
SHFQ7M4L6 AC242852.2-201ENST00000615738 1807 ntBASIC20.1■□□□□ 0.81
SHFQ7M4L6 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SHFQ7M4L6 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SHFQ7M4L6 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC20.1■□□□□ 0.81
SHFQ7M4L6 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SHFQ7M4L6 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SHFQ7M4L6 AC137767.1-201ENST00000602918 1920 ntBASIC20.1■□□□□ 0.81
SHFQ7M4L6 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SHFQ7M4L6 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SHFQ7M4L6 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
SHFQ7M4L6 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SHFQ7M4L6 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC20.09■□□□□ 0.81
SHFQ7M4L6 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
SHFQ7M4L6 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SHFQ7M4L6 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SHFQ7M4L6 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC20.09■□□□□ 0.81
SHFQ7M4L6 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC20.09■□□□□ 0.81
SHFQ7M4L6 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
SHFQ7M4L6 PKD1P6-201ENST00000343738 4769 ntBASIC20.08■□□□□ 0.81
SHFQ7M4L6 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
SHFQ7M4L6 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
SHFQ7M4L6 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SHFQ7M4L6 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC20.08■□□□□ 0.81
SHFQ7M4L6 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
SHFQ7M4L6 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC20.08■□□□□ 0.81
SHFQ7M4L6 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
SHFQ7M4L6 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
SHFQ7M4L6 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
SHFQ7M4L6 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
SHFQ7M4L6 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SHFQ7M4L6 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SHFQ7M4L6 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SHFQ7M4L6 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SHFQ7M4L6 AC120024.1-201ENST00000562672 995 ntBASIC20.07■□□□□ 0.8
SHFQ7M4L6 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC20.07■□□□□ 0.8
SHFQ7M4L6 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC20.07■□□□□ 0.8
SHFQ7M4L6 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
SHFQ7M4L6 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SHFQ7M4L6 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SHFQ7M4L6 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SHFQ7M4L6 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
SHFQ7M4L6 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SHFQ7M4L6 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SHFQ7M4L6 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC20.06■□□□□ 0.8
SHFQ7M4L6 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SHFQ7M4L6 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SHFQ7M4L6 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SHFQ7M4L6 KRT18P24-201ENST00000344739 1156 ntBASIC20.06■□□□□ 0.8
SHFQ7M4L6 ATP5G2P3-201ENST00000429083 425 ntBASIC20.06■□□□□ 0.8
SHFQ7M4L6 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
SHFQ7M4L6 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SHFQ7M4L6 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SHFQ7M4L6 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
SHFQ7M4L6 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SHFQ7M4L6 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SHFQ7M4L6 AL137060.1-201ENST00000618151 2648 ntBASIC20.06■□□□□ 0.8
SHFQ7M4L6 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SHFQ7M4L6 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SHFQ7M4L6 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC20.05■□□□□ 0.8
SHFQ7M4L6 AC004987.1-201ENST00000428627 508 ntBASIC20.05■□□□□ 0.8
SHFQ7M4L6 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC20.05■□□□□ 0.8
SHFQ7M4L6 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
SHFQ7M4L6 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC20.05■□□□□ 0.8
SHFQ7M4L6 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC20.05■□□□□ 0.8
SHFQ7M4L6 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.05■□□□□ 0.8
SHFQ7M4L6 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SHFQ7M4L6 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SHFQ7M4L6 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SHFQ7M4L6 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC20.04■□□□□ 0.8
SHFQ7M4L6 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
SHFQ7M4L6 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC20.04■□□□□ 0.8
SHFQ7M4L6 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SHFQ7M4L6 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC20.04■□□□□ 0.8
SHFQ7M4L6 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SHFQ7M4L6 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SHFQ7M4L6 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SHFQ7M4L6 THA1P-201ENST00000590384 1145 ntBASIC20.04■□□□□ 0.8
SHFQ7M4L6 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
SHFQ7M4L6 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SHFQ7M4L6 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
SHFQ7M4L6 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC20.04■□□□□ 0.8
SHFQ7M4L6 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
SHFQ7M4L6 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SHFQ7M4L6 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SHFQ7M4L6 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SHFQ7M4L6 ESRRAP2-201ENST00000418437 1549 ntBASIC20.03■□□□□ 0.8
SHFQ7M4L6 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SHFQ7M4L6 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SHFQ7M4L6 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
SHFQ7M4L6 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 139.1 ms