Protein–RNA interactions for Protein: Q6ZR62

RTL4, Retrotransposon Gag-like protein 4, humanhuman

Predictions only

Length 310 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL4Q6ZR62 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
RTL4Q6ZR62 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RTL4Q6ZR62 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RTL4Q6ZR62 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC20.8■□□□□ 0.92
RTL4Q6ZR62 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC20.8■□□□□ 0.92
RTL4Q6ZR62 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
RTL4Q6ZR62 USF2-207ENST00000595068 1612 ntTSL 5 BASIC20.8■□□□□ 0.92
RTL4Q6ZR62 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RTL4Q6ZR62 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
RTL4Q6ZR62 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC20.8■□□□□ 0.92
RTL4Q6ZR62 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
RTL4Q6ZR62 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
RTL4Q6ZR62 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC20.8■□□□□ 0.92
RTL4Q6ZR62 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC20.8■□□□□ 0.92
RTL4Q6ZR62 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC20.8■□□□□ 0.92
RTL4Q6ZR62 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
RTL4Q6ZR62 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC20.8■□□□□ 0.92
RTL4Q6ZR62 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RTL4Q6ZR62 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC20.8■□□□□ 0.92
RTL4Q6ZR62 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC20.79■□□□□ 0.92
RTL4Q6ZR62 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RTL4Q6ZR62 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC20.79■□□□□ 0.92
RTL4Q6ZR62 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RTL4Q6ZR62 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RTL4Q6ZR62 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RTL4Q6ZR62 AC092171.4-201ENST00000609130 632 ntBASIC20.79■□□□□ 0.92
RTL4Q6ZR62 AC110285.6-201ENST00000617652 491 ntBASIC20.79■□□□□ 0.92
RTL4Q6ZR62 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC20.79■□□□□ 0.92
RTL4Q6ZR62 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC20.79■□□□□ 0.92
RTL4Q6ZR62 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RTL4Q6ZR62 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RTL4Q6ZR62 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
RTL4Q6ZR62 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC20.79■□□□□ 0.92
RTL4Q6ZR62 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC20.79■□□□□ 0.92
RTL4Q6ZR62 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
RTL4Q6ZR62 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RTL4Q6ZR62 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RTL4Q6ZR62 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
RTL4Q6ZR62 AC068473.5-201ENST00000616428 2072 ntBASIC20.78■□□□□ 0.92
RTL4Q6ZR62 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RTL4Q6ZR62 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RTL4Q6ZR62 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
RTL4Q6ZR62 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RTL4Q6ZR62 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC20.78■□□□□ 0.92
RTL4Q6ZR62 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
RTL4Q6ZR62 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RTL4Q6ZR62 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RTL4Q6ZR62 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RTL4Q6ZR62 AC079834.2-201ENST00000609776 1949 ntBASIC20.77■□□□□ 0.92
RTL4Q6ZR62 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RTL4Q6ZR62 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RTL4Q6ZR62 DUX4L19-201ENST00000557448 1267 ntBASIC20.77■□□□□ 0.92
RTL4Q6ZR62 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
RTL4Q6ZR62 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
RTL4Q6ZR62 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC20.77■□□□□ 0.91
RTL4Q6ZR62 CLDN5-201ENST00000403084 2357 ntBASIC20.77■□□□□ 0.91
RTL4Q6ZR62 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RTL4Q6ZR62 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RTL4Q6ZR62 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC20.76■□□□□ 0.91
RTL4Q6ZR62 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RTL4Q6ZR62 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC20.76■□□□□ 0.91
RTL4Q6ZR62 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC20.76■□□□□ 0.91
RTL4Q6ZR62 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
RTL4Q6ZR62 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC20.76■□□□□ 0.91
RTL4Q6ZR62 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
RTL4Q6ZR62 C17orf82-201ENST00000623772 1530 ntBASIC20.76■□□□□ 0.91
RTL4Q6ZR62 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RTL4Q6ZR62 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
RTL4Q6ZR62 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
RTL4Q6ZR62 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RTL4Q6ZR62 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RTL4Q6ZR62 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
RTL4Q6ZR62 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RTL4Q6ZR62 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RTL4Q6ZR62 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RTL4Q6ZR62 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RTL4Q6ZR62 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RTL4Q6ZR62 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
RTL4Q6ZR62 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RTL4Q6ZR62 UNC93B3-201ENST00000308076 687 ntBASIC20.74■□□□□ 0.91
RTL4Q6ZR62 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RTL4Q6ZR62 MIR638-201ENST00000385237 100 ntBASIC20.74■□□□□ 0.91
RTL4Q6ZR62 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RTL4Q6ZR62 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC20.74■□□□□ 0.91
RTL4Q6ZR62 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC20.74■□□□□ 0.91
RTL4Q6ZR62 AC241377.3-202ENST00000626088 1088 ntBASIC20.74■□□□□ 0.91
RTL4Q6ZR62 AC241585.3-202ENST00000628937 1088 ntBASIC20.74■□□□□ 0.91
RTL4Q6ZR62 AC245100.8-202ENST00000629247 1058 ntBASIC20.74■□□□□ 0.91
RTL4Q6ZR62 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
RTL4Q6ZR62 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RTL4Q6ZR62 AC019069.1-201ENST00000610008 1333 ntBASIC20.74■□□□□ 0.91
RTL4Q6ZR62 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RTL4Q6ZR62 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
RTL4Q6ZR62 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
RTL4Q6ZR62 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC20.73■□□□□ 0.91
RTL4Q6ZR62 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RTL4Q6ZR62 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RTL4Q6ZR62 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RTL4Q6ZR62 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RTL4Q6ZR62 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms