Protein–RNA interactions for Protein: Q6XYD6

BRD3OS, BRD3 opposite strand, humanhuman

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD3OSQ6XYD6 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
BRD3OSQ6XYD6 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
BRD3OSQ6XYD6 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC18.12■□□□□ 0.49
BRD3OSQ6XYD6 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
BRD3OSQ6XYD6 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
BRD3OSQ6XYD6 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
BRD3OSQ6XYD6 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
BRD3OSQ6XYD6 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
BRD3OSQ6XYD6 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
BRD3OSQ6XYD6 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
BRD3OSQ6XYD6 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
BRD3OSQ6XYD6 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
BRD3OSQ6XYD6 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC18.11■□□□□ 0.49
BRD3OSQ6XYD6 MIR5787-201ENST00000611784 55 ntBASIC18.11■□□□□ 0.49
BRD3OSQ6XYD6 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
BRD3OSQ6XYD6 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
BRD3OSQ6XYD6 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
BRD3OSQ6XYD6 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC18.11■□□□□ 0.49
BRD3OSQ6XYD6 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
BRD3OSQ6XYD6 LINC01529-204ENST00000636474 1715 ntBASIC18.11■□□□□ 0.49
BRD3OSQ6XYD6 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC18.11■□□□□ 0.49
BRD3OSQ6XYD6 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
BRD3OSQ6XYD6 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
BRD3OSQ6XYD6 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
BRD3OSQ6XYD6 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
BRD3OSQ6XYD6 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC18.1■□□□□ 0.49
BRD3OSQ6XYD6 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
BRD3OSQ6XYD6 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
BRD3OSQ6XYD6 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC18.1■□□□□ 0.49
BRD3OSQ6XYD6 FP325331.1-202ENST00000623531 1380 ntBASIC18.1■□□□□ 0.49
BRD3OSQ6XYD6 TSPY26P-201ENST00000476365 1326 ntBASIC18.1■□□□□ 0.49
BRD3OSQ6XYD6 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
BRD3OSQ6XYD6 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC18.1■□□□□ 0.49
BRD3OSQ6XYD6 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC18.1■□□□□ 0.49
BRD3OSQ6XYD6 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
BRD3OSQ6XYD6 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC18.1■□□□□ 0.49
BRD3OSQ6XYD6 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
BRD3OSQ6XYD6 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
BRD3OSQ6XYD6 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
BRD3OSQ6XYD6 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
BRD3OSQ6XYD6 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
BRD3OSQ6XYD6 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
BRD3OSQ6XYD6 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
BRD3OSQ6XYD6 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
BRD3OSQ6XYD6 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
BRD3OSQ6XYD6 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
BRD3OSQ6XYD6 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC18.09■□□□□ 0.49
BRD3OSQ6XYD6 DUX4L4-201ENST00000566884 1269 ntBASIC18.09■□□□□ 0.49
BRD3OSQ6XYD6 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC18.09■□□□□ 0.49
BRD3OSQ6XYD6 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC18.09■□□□□ 0.49
BRD3OSQ6XYD6 AL499627.2-201ENST00000606283 725 ntBASIC18.09■□□□□ 0.49
BRD3OSQ6XYD6 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
BRD3OSQ6XYD6 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
BRD3OSQ6XYD6 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC18.09■□□□□ 0.49
BRD3OSQ6XYD6 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC18.08■□□□□ 0.49
BRD3OSQ6XYD6 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
BRD3OSQ6XYD6 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
BRD3OSQ6XYD6 JTB-203ENST00000368589 1216 ntTSL 2 BASIC18.08■□□□□ 0.48
BRD3OSQ6XYD6 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
BRD3OSQ6XYD6 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC18.08■□□□□ 0.48
BRD3OSQ6XYD6 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
BRD3OSQ6XYD6 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
BRD3OSQ6XYD6 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC18.08■□□□□ 0.48
BRD3OSQ6XYD6 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
BRD3OSQ6XYD6 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC18.08■□□□□ 0.48
BRD3OSQ6XYD6 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC18.08■□□□□ 0.48
BRD3OSQ6XYD6 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
BRD3OSQ6XYD6 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC18.08■□□□□ 0.48
BRD3OSQ6XYD6 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
BRD3OSQ6XYD6 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
BRD3OSQ6XYD6 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
BRD3OSQ6XYD6 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
BRD3OSQ6XYD6 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC18.07■□□□□ 0.48
BRD3OSQ6XYD6 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC18.07■□□□□ 0.48
BRD3OSQ6XYD6 AC010525.1-201ENST00000585559 441 ntBASIC18.07■□□□□ 0.48
BRD3OSQ6XYD6 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC18.07■□□□□ 0.48
BRD3OSQ6XYD6 MIR6821-201ENST00000617625 74 ntBASIC18.07■□□□□ 0.48
BRD3OSQ6XYD6 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
BRD3OSQ6XYD6 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
BRD3OSQ6XYD6 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
BRD3OSQ6XYD6 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
BRD3OSQ6XYD6 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
BRD3OSQ6XYD6 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
BRD3OSQ6XYD6 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC18.07■□□□□ 0.48
BRD3OSQ6XYD6 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
BRD3OSQ6XYD6 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC18.06■□□□□ 0.48
BRD3OSQ6XYD6 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC18.06■□□□□ 0.48
BRD3OSQ6XYD6 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
BRD3OSQ6XYD6 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
BRD3OSQ6XYD6 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
BRD3OSQ6XYD6 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
BRD3OSQ6XYD6 AC097381.1-201ENST00000429019 1296 ntBASIC18.06■□□□□ 0.48
BRD3OSQ6XYD6 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
BRD3OSQ6XYD6 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC18.06■□□□□ 0.48
BRD3OSQ6XYD6 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC18.06■□□□□ 0.48
BRD3OSQ6XYD6 AC087623.3-201ENST00000607047 1098 ntBASIC18.06■□□□□ 0.48
BRD3OSQ6XYD6 AC092666.2-201ENST00000613287 246 ntBASIC18.06■□□□□ 0.48
BRD3OSQ6XYD6 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
BRD3OSQ6XYD6 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
BRD3OSQ6XYD6 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms