Protein–RNA interactions for Protein: Q6W349

LINC00575, Putative uncharacterized protein encoded by LINC00575, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00575Q6W349 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
LINC00575Q6W349 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
LINC00575Q6W349 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
LINC00575Q6W349 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LINC00575Q6W349 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC14.13□□□□□ -0.15
LINC00575Q6W349 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
LINC00575Q6W349 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LINC00575Q6W349 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LINC00575Q6W349 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
LINC00575Q6W349 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LINC00575Q6W349 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LINC00575Q6W349 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
LINC00575Q6W349 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
LINC00575Q6W349 AC090877.2-201ENST00000558441 1738 ntBASIC14.12□□□□□ -0.15
LINC00575Q6W349 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
LINC00575Q6W349 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LINC00575Q6W349 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LINC00575Q6W349 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LINC00575Q6W349 PALM-208ENST00000592155 2272 ntTSL 4 BASIC14.12□□□□□ -0.15
LINC00575Q6W349 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
LINC00575Q6W349 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
LINC00575Q6W349 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LINC00575Q6W349 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC14.12□□□□□ -0.15
LINC00575Q6W349 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
LINC00575Q6W349 AC026310.3-201ENST00000625186 2373 ntBASIC14.12□□□□□ -0.15
LINC00575Q6W349 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
LINC00575Q6W349 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
LINC00575Q6W349 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
LINC00575Q6W349 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC14.12□□□□□ -0.15
LINC00575Q6W349 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LINC00575Q6W349 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
LINC00575Q6W349 AL022069.1-201ENST00000568025 1636 ntBASIC14.12□□□□□ -0.15
LINC00575Q6W349 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LINC00575Q6W349 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LINC00575Q6W349 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC14.11□□□□□ -0.15
LINC00575Q6W349 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LINC00575Q6W349 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
LINC00575Q6W349 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
LINC00575Q6W349 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC14.11□□□□□ -0.15
LINC00575Q6W349 RP9P-202ENST00000450133 1212 ntBASIC14.11□□□□□ -0.15
LINC00575Q6W349 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
LINC00575Q6W349 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
LINC00575Q6W349 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC14.11□□□□□ -0.15
LINC00575Q6W349 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
LINC00575Q6W349 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
LINC00575Q6W349 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC14.11□□□□□ -0.15
LINC00575Q6W349 REST-210ENST00000638187 1334 ntTSL 5 BASIC14.11□□□□□ -0.15
LINC00575Q6W349 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC14.11□□□□□ -0.15
LINC00575Q6W349 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
LINC00575Q6W349 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC14.11□□□□□ -0.15
LINC00575Q6W349 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LINC00575Q6W349 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
LINC00575Q6W349 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
LINC00575Q6W349 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LINC00575Q6W349 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC14.1□□□□□ -0.15
LINC00575Q6W349 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
LINC00575Q6W349 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LINC00575Q6W349 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC14.1□□□□□ -0.15
LINC00575Q6W349 AGPS-202ENST00000409888 815 ntTSL 4 BASIC14.1□□□□□ -0.15
LINC00575Q6W349 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC14.1□□□□□ -0.15
LINC00575Q6W349 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LINC00575Q6W349 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
LINC00575Q6W349 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
LINC00575Q6W349 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LINC00575Q6W349 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
LINC00575Q6W349 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
LINC00575Q6W349 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LINC00575Q6W349 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
LINC00575Q6W349 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC14.1□□□□□ -0.15
LINC00575Q6W349 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC14.1□□□□□ -0.15
LINC00575Q6W349 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC14.09□□□□□ -0.15
LINC00575Q6W349 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LINC00575Q6W349 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
LINC00575Q6W349 EI24-204ENST00000527235 1625 ntTSL 5 BASIC14.09□□□□□ -0.15
LINC00575Q6W349 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LINC00575Q6W349 AC079630.1-202ENST00000618127 1840 ntBASIC14.09□□□□□ -0.15
LINC00575Q6W349 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
LINC00575Q6W349 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
LINC00575Q6W349 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC14.09□□□□□ -0.15
LINC00575Q6W349 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC14.09□□□□□ -0.15
LINC00575Q6W349 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LINC00575Q6W349 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC14.09□□□□□ -0.15
LINC00575Q6W349 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
LINC00575Q6W349 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC14.09□□□□□ -0.15
LINC00575Q6W349 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LINC00575Q6W349 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
LINC00575Q6W349 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
LINC00575Q6W349 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC14.09□□□□□ -0.15
LINC00575Q6W349 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC14.08□□□□□ -0.15
LINC00575Q6W349 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.15
LINC00575Q6W349 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC14.08□□□□□ -0.15
LINC00575Q6W349 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
LINC00575Q6W349 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
LINC00575Q6W349 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LINC00575Q6W349 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LINC00575Q6W349 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC14.08□□□□□ -0.16
LINC00575Q6W349 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
LINC00575Q6W349 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
LINC00575Q6W349 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
LINC00575Q6W349 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 11.3 ms