Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
NHLRC1Q6VVB1 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
NHLRC1Q6VVB1 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
NHLRC1Q6VVB1 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
NHLRC1Q6VVB1 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC20.01■□□□□ 0.79
NHLRC1Q6VVB1 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
NHLRC1Q6VVB1 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
NHLRC1Q6VVB1 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC20.01■□□□□ 0.79
NHLRC1Q6VVB1 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
NHLRC1Q6VVB1 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC20.01■□□□□ 0.79
NHLRC1Q6VVB1 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
NHLRC1Q6VVB1 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
NHLRC1Q6VVB1 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
NHLRC1Q6VVB1 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
NHLRC1Q6VVB1 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC20.01■□□□□ 0.79
NHLRC1Q6VVB1 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC20■□□□□ 0.79
NHLRC1Q6VVB1 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NHLRC1Q6VVB1 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NHLRC1Q6VVB1 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NHLRC1Q6VVB1 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC20■□□□□ 0.79
NHLRC1Q6VVB1 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC20■□□□□ 0.79
NHLRC1Q6VVB1 AC009102.2-201ENST00000606772 1639 ntBASIC20■□□□□ 0.79
NHLRC1Q6VVB1 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC20■□□□□ 0.79
NHLRC1Q6VVB1 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC20■□□□□ 0.79
NHLRC1Q6VVB1 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC20■□□□□ 0.79
NHLRC1Q6VVB1 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NHLRC1Q6VVB1 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC20■□□□□ 0.79
NHLRC1Q6VVB1 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
NHLRC1Q6VVB1 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
NHLRC1Q6VVB1 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
NHLRC1Q6VVB1 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
NHLRC1Q6VVB1 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
NHLRC1Q6VVB1 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
NHLRC1Q6VVB1 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
NHLRC1Q6VVB1 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
NHLRC1Q6VVB1 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
NHLRC1Q6VVB1 AC144652.1-201ENST00000609974 1624 ntBASIC19.98■□□□□ 0.79
NHLRC1Q6VVB1 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
NHLRC1Q6VVB1 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
NHLRC1Q6VVB1 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC19.98■□□□□ 0.79
NHLRC1Q6VVB1 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
NHLRC1Q6VVB1 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
NHLRC1Q6VVB1 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
NHLRC1Q6VVB1 ASB1-202ENST00000409297 878 ntTSL 5 BASIC19.98■□□□□ 0.79
NHLRC1Q6VVB1 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
NHLRC1Q6VVB1 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
NHLRC1Q6VVB1 C9orf163-202ENST00000624034 2573 ntBASIC19.98■□□□□ 0.79
NHLRC1Q6VVB1 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
NHLRC1Q6VVB1 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
NHLRC1Q6VVB1 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
NHLRC1Q6VVB1 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
NHLRC1Q6VVB1 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC19.97■□□□□ 0.79
NHLRC1Q6VVB1 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC19.97■□□□□ 0.79
NHLRC1Q6VVB1 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
NHLRC1Q6VVB1 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
NHLRC1Q6VVB1 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC19.97■□□□□ 0.79
NHLRC1Q6VVB1 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC19.97■□□□□ 0.79
NHLRC1Q6VVB1 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC19.97■□□□□ 0.79
NHLRC1Q6VVB1 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
NHLRC1Q6VVB1 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC19.97■□□□□ 0.79
NHLRC1Q6VVB1 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC19.97■□□□□ 0.79
NHLRC1Q6VVB1 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
NHLRC1Q6VVB1 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
NHLRC1Q6VVB1 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
NHLRC1Q6VVB1 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
NHLRC1Q6VVB1 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
NHLRC1Q6VVB1 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
NHLRC1Q6VVB1 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC19.96■□□□□ 0.79
NHLRC1Q6VVB1 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
NHLRC1Q6VVB1 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
NHLRC1Q6VVB1 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
NHLRC1Q6VVB1 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
NHLRC1Q6VVB1 KRT16P3-201ENST00000439127 1283 ntBASIC19.96■□□□□ 0.79
NHLRC1Q6VVB1 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC19.96■□□□□ 0.79
NHLRC1Q6VVB1 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
NHLRC1Q6VVB1 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC19.96■□□□□ 0.79
NHLRC1Q6VVB1 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC19.96■□□□□ 0.79
NHLRC1Q6VVB1 AL353803.4-201ENST00000565882 1934 ntBASIC19.96■□□□□ 0.79
NHLRC1Q6VVB1 FP325331.1-202ENST00000623531 1380 ntBASIC19.95■□□□□ 0.79
NHLRC1Q6VVB1 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
NHLRC1Q6VVB1 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NHLRC1Q6VVB1 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
NHLRC1Q6VVB1 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC19.95■□□□□ 0.78
NHLRC1Q6VVB1 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NHLRC1Q6VVB1 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC19.95■□□□□ 0.78
NHLRC1Q6VVB1 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC19.95■□□□□ 0.78
NHLRC1Q6VVB1 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC19.95■□□□□ 0.78
NHLRC1Q6VVB1 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC19.95■□□□□ 0.78
NHLRC1Q6VVB1 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC19.95■□□□□ 0.78
NHLRC1Q6VVB1 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NHLRC1Q6VVB1 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC19.94■□□□□ 0.78
NHLRC1Q6VVB1 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
NHLRC1Q6VVB1 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
NHLRC1Q6VVB1 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
NHLRC1Q6VVB1 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
NHLRC1Q6VVB1 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
NHLRC1Q6VVB1 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC19.93■□□□□ 0.78
NHLRC1Q6VVB1 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
NHLRC1Q6VVB1 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC19.93■□□□□ 0.78
NHLRC1Q6VVB1 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms