Protein–RNA interactions for Protein: Q6P1M0

SLC27A4, Long-chain fatty acid transport protein 4, humanhuman

Predictions only

Length 643 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC27A4Q6P1M0 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SLC27A4Q6P1M0 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC20.27■□□□□ 0.84
SLC27A4Q6P1M0 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC20.27■□□□□ 0.84
SLC27A4Q6P1M0 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.83
SLC27A4Q6P1M0 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
SLC27A4Q6P1M0 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC20.26■□□□□ 0.83
SLC27A4Q6P1M0 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC20.26■□□□□ 0.83
SLC27A4Q6P1M0 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SLC27A4Q6P1M0 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC20.26■□□□□ 0.83
SLC27A4Q6P1M0 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SLC27A4Q6P1M0 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
SLC27A4Q6P1M0 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SLC27A4Q6P1M0 GUK1-208ENST00000366728 842 ntTSL 2 BASIC20.26■□□□□ 0.83
SLC27A4Q6P1M0 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC20.26■□□□□ 0.83
SLC27A4Q6P1M0 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SLC27A4Q6P1M0 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC20.26■□□□□ 0.83
SLC27A4Q6P1M0 AC120024.1-201ENST00000562672 995 ntBASIC20.26■□□□□ 0.83
SLC27A4Q6P1M0 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC20.26■□□□□ 0.83
SLC27A4Q6P1M0 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC20.26■□□□□ 0.83
SLC27A4Q6P1M0 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC20.26■□□□□ 0.83
SLC27A4Q6P1M0 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
SLC27A4Q6P1M0 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SLC27A4Q6P1M0 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SLC27A4Q6P1M0 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
SLC27A4Q6P1M0 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
SLC27A4Q6P1M0 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SLC27A4Q6P1M0 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SLC27A4Q6P1M0 WWC2-AS2-201ENST00000578387 2183 ntBASIC20.25■□□□□ 0.83
SLC27A4Q6P1M0 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SLC27A4Q6P1M0 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SLC27A4Q6P1M0 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SLC27A4Q6P1M0 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
SLC27A4Q6P1M0 AL353803.4-201ENST00000565882 1934 ntBASIC20.25■□□□□ 0.83
SLC27A4Q6P1M0 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC20.25■□□□□ 0.83
SLC27A4Q6P1M0 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SLC27A4Q6P1M0 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SLC27A4Q6P1M0 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SLC27A4Q6P1M0 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
SLC27A4Q6P1M0 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SLC27A4Q6P1M0 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC20.24■□□□□ 0.83
SLC27A4Q6P1M0 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SLC27A4Q6P1M0 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SLC27A4Q6P1M0 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SLC27A4Q6P1M0 AF131216.4-201ENST00000638924 1588 ntBASIC20.24■□□□□ 0.83
SLC27A4Q6P1M0 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
SLC27A4Q6P1M0 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SLC27A4Q6P1M0 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SLC27A4Q6P1M0 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SLC27A4Q6P1M0 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
SLC27A4Q6P1M0 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
SLC27A4Q6P1M0 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC20.23■□□□□ 0.83
SLC27A4Q6P1M0 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SLC27A4Q6P1M0 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SLC27A4Q6P1M0 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
SLC27A4Q6P1M0 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SLC27A4Q6P1M0 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC20.23■□□□□ 0.83
SLC27A4Q6P1M0 AC004448.1-201ENST00000458332 883 ntBASIC20.23■□□□□ 0.83
SLC27A4Q6P1M0 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC20.23■□□□□ 0.83
SLC27A4Q6P1M0 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC20.23■□□□□ 0.83
SLC27A4Q6P1M0 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SLC27A4Q6P1M0 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC20.23■□□□□ 0.83
SLC27A4Q6P1M0 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
SLC27A4Q6P1M0 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SLC27A4Q6P1M0 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
SLC27A4Q6P1M0 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC20.22■□□□□ 0.83
SLC27A4Q6P1M0 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC20.22■□□□□ 0.83
SLC27A4Q6P1M0 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SLC27A4Q6P1M0 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
SLC27A4Q6P1M0 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
SLC27A4Q6P1M0 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SLC27A4Q6P1M0 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
SLC27A4Q6P1M0 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
SLC27A4Q6P1M0 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SLC27A4Q6P1M0 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC20.22■□□□□ 0.83
SLC27A4Q6P1M0 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC20.22■□□□□ 0.83
SLC27A4Q6P1M0 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
SLC27A4Q6P1M0 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
SLC27A4Q6P1M0 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC20.21■□□□□ 0.83
SLC27A4Q6P1M0 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC20.21■□□□□ 0.83
SLC27A4Q6P1M0 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SLC27A4Q6P1M0 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC20.21■□□□□ 0.83
SLC27A4Q6P1M0 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
SLC27A4Q6P1M0 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC20.21■□□□□ 0.83
SLC27A4Q6P1M0 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC20.21■□□□□ 0.83
SLC27A4Q6P1M0 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC20.21■□□□□ 0.83
SLC27A4Q6P1M0 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
SLC27A4Q6P1M0 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SLC27A4Q6P1M0 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC20.21■□□□□ 0.83
SLC27A4Q6P1M0 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SLC27A4Q6P1M0 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
SLC27A4Q6P1M0 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SLC27A4Q6P1M0 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SLC27A4Q6P1M0 KRT18P24-201ENST00000344739 1156 ntBASIC20.2■□□□□ 0.82
SLC27A4Q6P1M0 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC20.2■□□□□ 0.82
SLC27A4Q6P1M0 MIR4281-201ENST00000580852 62 ntBASIC20.2■□□□□ 0.82
SLC27A4Q6P1M0 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SLC27A4Q6P1M0 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SLC27A4Q6P1M0 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SLC27A4Q6P1M0 MYB-221ENST00000527615 2381 ntTSL 5 BASIC20.2■□□□□ 0.82
SLC27A4Q6P1M0 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms