Protein–RNA interactions for Protein: Q6P161

MRPL54, 39S ribosomal protein L54, mitochondrial, humanhuman

Known RBP Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54Q6P161 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
MRPL54Q6P161 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
MRPL54Q6P161 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
MRPL54Q6P161 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC16.81■□□□□ 0.28
MRPL54Q6P161 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
MRPL54Q6P161 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
MRPL54Q6P161 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
MRPL54Q6P161 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
MRPL54Q6P161 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
MRPL54Q6P161 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
MRPL54Q6P161 DUX4L29-201ENST00000425409 679 ntBASIC16.81■□□□□ 0.28
MRPL54Q6P161 BOD1-206ENST00000480951 814 ntTSL 2 BASIC16.81■□□□□ 0.28
MRPL54Q6P161 AC126177.7-201ENST00000547904 679 ntBASIC16.81■□□□□ 0.28
MRPL54Q6P161 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
MRPL54Q6P161 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
MRPL54Q6P161 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
MRPL54Q6P161 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
MRPL54Q6P161 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
MRPL54Q6P161 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
MRPL54Q6P161 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
MRPL54Q6P161 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
MRPL54Q6P161 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
MRPL54Q6P161 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
MRPL54Q6P161 AC026310.3-201ENST00000625186 2373 ntBASIC16.8■□□□□ 0.28
MRPL54Q6P161 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC16.8■□□□□ 0.28
MRPL54Q6P161 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
MRPL54Q6P161 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
MRPL54Q6P161 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
MRPL54Q6P161 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
MRPL54Q6P161 AC044849.2-201ENST00000606596 710 ntBASIC16.8■□□□□ 0.28
MRPL54Q6P161 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
MRPL54Q6P161 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
MRPL54Q6P161 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
MRPL54Q6P161 AC139530.1-201ENST00000575312 1977 ntBASIC16.8■□□□□ 0.28
MRPL54Q6P161 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
MRPL54Q6P161 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
MRPL54Q6P161 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
MRPL54Q6P161 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
MRPL54Q6P161 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
MRPL54Q6P161 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
MRPL54Q6P161 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
MRPL54Q6P161 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
MRPL54Q6P161 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
MRPL54Q6P161 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
MRPL54Q6P161 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
MRPL54Q6P161 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
MRPL54Q6P161 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC16.79■□□□□ 0.28
MRPL54Q6P161 HLA-V-202ENST00000446817 847 ntBASIC16.79■□□□□ 0.28
MRPL54Q6P161 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC16.79■□□□□ 0.28
MRPL54Q6P161 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
MRPL54Q6P161 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
MRPL54Q6P161 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC16.79■□□□□ 0.28
MRPL54Q6P161 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
MRPL54Q6P161 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
MRPL54Q6P161 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
MRPL54Q6P161 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
MRPL54Q6P161 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC16.78■□□□□ 0.28
MRPL54Q6P161 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
MRPL54Q6P161 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
MRPL54Q6P161 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC16.78■□□□□ 0.28
MRPL54Q6P161 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
MRPL54Q6P161 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
MRPL54Q6P161 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
MRPL54Q6P161 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
MRPL54Q6P161 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC16.78■□□□□ 0.28
MRPL54Q6P161 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
MRPL54Q6P161 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
MRPL54Q6P161 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
MRPL54Q6P161 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
MRPL54Q6P161 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
MRPL54Q6P161 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
MRPL54Q6P161 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC16.78■□□□□ 0.28
MRPL54Q6P161 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
MRPL54Q6P161 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
MRPL54Q6P161 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC16.77■□□□□ 0.28
MRPL54Q6P161 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
MRPL54Q6P161 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC16.77■□□□□ 0.28
MRPL54Q6P161 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
MRPL54Q6P161 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC16.77■□□□□ 0.28
MRPL54Q6P161 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC16.77■□□□□ 0.28
MRPL54Q6P161 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC16.77■□□□□ 0.28
MRPL54Q6P161 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
MRPL54Q6P161 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
MRPL54Q6P161 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC16.77■□□□□ 0.28
MRPL54Q6P161 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
MRPL54Q6P161 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC16.77■□□□□ 0.27
MRPL54Q6P161 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
MRPL54Q6P161 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC16.76■□□□□ 0.27
MRPL54Q6P161 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
MRPL54Q6P161 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
MRPL54Q6P161 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
MRPL54Q6P161 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC16.76■□□□□ 0.27
MRPL54Q6P161 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC16.76■□□□□ 0.27
MRPL54Q6P161 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
MRPL54Q6P161 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
MRPL54Q6P161 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
MRPL54Q6P161 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC16.76■□□□□ 0.27
MRPL54Q6P161 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
MRPL54Q6P161 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
MRPL54Q6P161 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 14.7 ms