Protein–RNA interactions for Protein: Q63HN8

RNF213, E3 ubiquitin-protein ligase RNF213, humanhuman

Predictions only

Length 5,207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF213Q63HN8 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC12.18□□□□□ -0.46
RNF213Q63HN8 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC12.18□□□□□ -0.46
RNF213Q63HN8 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
RNF213Q63HN8 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC12.18□□□□□ -0.46
RNF213Q63HN8 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
RNF213Q63HN8 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC12.18□□□□□ -0.46
RNF213Q63HN8 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
RNF213Q63HN8 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
RNF213Q63HN8 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC12.18□□□□□ -0.46
RNF213Q63HN8 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
RNF213Q63HN8 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC12.18□□□□□ -0.46
RNF213Q63HN8 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC12.18□□□□□ -0.46
RNF213Q63HN8 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
RNF213Q63HN8 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
RNF213Q63HN8 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
RNF213Q63HN8 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC12.18□□□□□ -0.46
RNF213Q63HN8 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
RNF213Q63HN8 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
RNF213Q63HN8 ARMC10P1-201ENST00000313754 855 ntBASIC12.17□□□□□ -0.46
RNF213Q63HN8 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC12.17□□□□□ -0.46
RNF213Q63HN8 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
RNF213Q63HN8 AC142381.4-202ENST00000563973 229 ntBASIC12.17□□□□□ -0.46
RNF213Q63HN8 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
RNF213Q63HN8 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
RNF213Q63HN8 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC12.17□□□□□ -0.46
RNF213Q63HN8 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
RNF213Q63HN8 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
RNF213Q63HN8 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
RNF213Q63HN8 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
RNF213Q63HN8 AC105036.2-201ENST00000569468 176 ntBASIC12.17□□□□□ -0.46
RNF213Q63HN8 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
RNF213Q63HN8 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
RNF213Q63HN8 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
RNF213Q63HN8 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC12.17□□□□□ -0.46
RNF213Q63HN8 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC12.17□□□□□ -0.46
RNF213Q63HN8 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
RNF213Q63HN8 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
RNF213Q63HN8 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
RNF213Q63HN8 BRI3-207ENST00000539286 699 ntTSL 2 BASIC12.17□□□□□ -0.46
RNF213Q63HN8 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC12.17□□□□□ -0.46
RNF213Q63HN8 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC12.17□□□□□ -0.46
RNF213Q63HN8 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
RNF213Q63HN8 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC12.16□□□□□ -0.46
RNF213Q63HN8 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC12.16□□□□□ -0.46
RNF213Q63HN8 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
RNF213Q63HN8 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
RNF213Q63HN8 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
RNF213Q63HN8 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
RNF213Q63HN8 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC12.16□□□□□ -0.46
RNF213Q63HN8 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC12.16□□□□□ -0.46
RNF213Q63HN8 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC12.16□□□□□ -0.46
RNF213Q63HN8 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC12.16□□□□□ -0.46
RNF213Q63HN8 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
RNF213Q63HN8 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC12.16□□□□□ -0.46
RNF213Q63HN8 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
RNF213Q63HN8 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
RNF213Q63HN8 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
RNF213Q63HN8 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
RNF213Q63HN8 SNORA78-201ENST00000459373 127 ntBASIC12.16□□□□□ -0.46
RNF213Q63HN8 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC12.16□□□□□ -0.46
RNF213Q63HN8 BX088651.1-201ENST00000540551 451 ntBASIC12.16□□□□□ -0.46
RNF213Q63HN8 VGF-203ENST00000611537 1622 ntTSL 5 BASIC12.16□□□□□ -0.46
RNF213Q63HN8 KRT18P11-201ENST00000435214 1283 ntBASIC12.16□□□□□ -0.46
RNF213Q63HN8 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC12.16□□□□□ -0.46
RNF213Q63HN8 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
RNF213Q63HN8 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
RNF213Q63HN8 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
RNF213Q63HN8 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC12.16□□□□□ -0.46
RNF213Q63HN8 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
RNF213Q63HN8 AC133041.1-202ENST00000642053 222 ntBASIC12.16□□□□□ -0.46
RNF213Q63HN8 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
RNF213Q63HN8 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
RNF213Q63HN8 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC12.15□□□□□ -0.46
RNF213Q63HN8 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
RNF213Q63HN8 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC12.15□□□□□ -0.46
RNF213Q63HN8 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC12.15□□□□□ -0.46
RNF213Q63HN8 AC009086.3-201ENST00000623486 1008 ntBASIC12.15□□□□□ -0.46
RNF213Q63HN8 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
RNF213Q63HN8 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC12.15□□□□□ -0.46
RNF213Q63HN8 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
RNF213Q63HN8 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC12.15□□□□□ -0.46
RNF213Q63HN8 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
RNF213Q63HN8 RPS20-210ENST00000523936 899 ntTSL 2 BASIC12.15□□□□□ -0.46
RNF213Q63HN8 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC12.15□□□□□ -0.46
RNF213Q63HN8 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
RNF213Q63HN8 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC12.15□□□□□ -0.46
RNF213Q63HN8 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
RNF213Q63HN8 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC12.15□□□□□ -0.46
RNF213Q63HN8 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC12.15□□□□□ -0.47
RNF213Q63HN8 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
RNF213Q63HN8 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
RNF213Q63HN8 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC12.14□□□□□ -0.47
RNF213Q63HN8 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
RNF213Q63HN8 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC12.14□□□□□ -0.47
RNF213Q63HN8 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC12.14□□□□□ -0.47
RNF213Q63HN8 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC12.14□□□□□ -0.47
RNF213Q63HN8 ESRRAP1-201ENST00000400596 1257 ntBASIC12.14□□□□□ -0.47
RNF213Q63HN8 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
RNF213Q63HN8 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC12.14□□□□□ -0.47
RNF213Q63HN8 DUX4L16-201ENST00000555130 1264 ntBASIC12.14□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms