Protein–RNA interactions for Protein: Q56UQ5

TPT1-like protein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q56UQ5 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Q56UQ5 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Q56UQ5 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC17.62■□□□□ 0.41
Q56UQ5 AC137630.3-201ENST00000607245 391 ntBASIC17.62■□□□□ 0.41
Q56UQ5 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Q56UQ5 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Q56UQ5 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Q56UQ5 ME2-208ENST00000638937 2471 ntTSL 5 BASIC17.61■□□□□ 0.41
Q56UQ5 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC17.61■□□□□ 0.41
Q56UQ5 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC17.61■□□□□ 0.41
Q56UQ5 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Q56UQ5 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC17.61■□□□□ 0.41
Q56UQ5 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC17.61■□□□□ 0.41
Q56UQ5 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Q56UQ5 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC17.61■□□□□ 0.41
Q56UQ5 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Q56UQ5 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC17.61■□□□□ 0.41
Q56UQ5 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Q56UQ5 AC092068.2-201ENST00000590491 1708 ntBASIC17.61■□□□□ 0.41
Q56UQ5 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Q56UQ5 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Q56UQ5 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Q56UQ5 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Q56UQ5 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Q56UQ5 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Q56UQ5 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Q56UQ5 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Q56UQ5 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Q56UQ5 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC17.6■□□□□ 0.41
Q56UQ5 SNX5-217ENST00000606557 1087 ntBASIC17.6■□□□□ 0.41
Q56UQ5 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Q56UQ5 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Q56UQ5 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Q56UQ5 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Q56UQ5 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Q56UQ5 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Q56UQ5 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Q56UQ5 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Q56UQ5 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Q56UQ5 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC17.59■□□□□ 0.41
Q56UQ5 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Q56UQ5 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC17.59■□□□□ 0.41
Q56UQ5 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC17.59■□□□□ 0.41
Q56UQ5 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Q56UQ5 REST-206ENST00000612429 1376 ntTSL 5 BASIC17.59■□□□□ 0.41
Q56UQ5 REST-207ENST00000616975 1370 ntTSL 5 BASIC17.59■□□□□ 0.41
Q56UQ5 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Q56UQ5 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC17.59■□□□□ 0.41
Q56UQ5 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC17.59■□□□□ 0.41
Q56UQ5 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Q56UQ5 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Q56UQ5 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC17.59■□□□□ 0.41
Q56UQ5 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Q56UQ5 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Q56UQ5 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Q56UQ5 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Q56UQ5 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC17.59■□□□□ 0.41
Q56UQ5 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Q56UQ5 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Q56UQ5 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Q56UQ5 C9orf163-202ENST00000624034 2573 ntBASIC17.58■□□□□ 0.41
Q56UQ5 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Q56UQ5 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Q56UQ5 RNF146-205ENST00000477776 762 ntTSL 3 BASIC17.58■□□□□ 0.4
Q56UQ5 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC17.58■□□□□ 0.4
Q56UQ5 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Q56UQ5 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Q56UQ5 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC17.58■□□□□ 0.4
Q56UQ5 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Q56UQ5 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Q56UQ5 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Q56UQ5 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC17.57■□□□□ 0.4
Q56UQ5 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC17.57■□□□□ 0.4
Q56UQ5 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Q56UQ5 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Q56UQ5 KRT125P-201ENST00000546827 989 ntBASIC17.57■□□□□ 0.4
Q56UQ5 PRTG-204ENST00000561292 833 ntTSL 3 BASIC17.57■□□□□ 0.4
Q56UQ5 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC17.57■□□□□ 0.4
Q56UQ5 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Q56UQ5 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Q56UQ5 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Q56UQ5 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Q56UQ5 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Q56UQ5 USF2-207ENST00000595068 1612 ntTSL 5 BASIC17.57■□□□□ 0.4
Q56UQ5 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC17.57■□□□□ 0.4
Q56UQ5 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Q56UQ5 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Q56UQ5 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Q56UQ5 H19-210ENST00000439725 1929 ntTSL 2 BASIC17.57■□□□□ 0.4
Q56UQ5 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Q56UQ5 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
Q56UQ5 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC17.56■□□□□ 0.4
Q56UQ5 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Q56UQ5 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Q56UQ5 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Q56UQ5 SENP5-202ENST00000419026 973 ntTSL 3 BASIC17.56■□□□□ 0.4
Q56UQ5 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC17.56■□□□□ 0.4
Q56UQ5 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Q56UQ5 RARRES2P1-201ENST00000474487 481 ntBASIC17.56■□□□□ 0.4
Q56UQ5 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 15.7 ms