Protein–RNA interactions for Protein: Q53GI3

ZNF394, Zinc finger protein 394, humanhuman

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF394Q53GI3 AC099791.2-201ENST00000605725 427 ntBASIC23.87■■□□□ 1.41
ZNF394Q53GI3 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC23.87■■□□□ 1.41
ZNF394Q53GI3 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
ZNF394Q53GI3 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
ZNF394Q53GI3 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
ZNF394Q53GI3 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
ZNF394Q53GI3 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC23.87■■□□□ 1.41
ZNF394Q53GI3 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
ZNF394Q53GI3 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
ZNF394Q53GI3 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
ZNF394Q53GI3 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
ZNF394Q53GI3 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC23.86■■□□□ 1.41
ZNF394Q53GI3 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC23.86■■□□□ 1.41
ZNF394Q53GI3 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
ZNF394Q53GI3 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
ZNF394Q53GI3 LINC01529-204ENST00000636474 1715 ntBASIC23.85■■□□□ 1.41
ZNF394Q53GI3 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
ZNF394Q53GI3 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC23.85■■□□□ 1.41
ZNF394Q53GI3 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
ZNF394Q53GI3 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC23.85■■□□□ 1.41
ZNF394Q53GI3 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC23.85■■□□□ 1.41
ZNF394Q53GI3 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
ZNF394Q53GI3 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
ZNF394Q53GI3 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
ZNF394Q53GI3 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC23.84■■□□□ 1.41
ZNF394Q53GI3 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
ZNF394Q53GI3 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
ZNF394Q53GI3 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC23.84■■□□□ 1.41
ZNF394Q53GI3 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC23.84■■□□□ 1.41
ZNF394Q53GI3 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
ZNF394Q53GI3 ME2-208ENST00000638937 2471 ntTSL 5 BASIC23.84■■□□□ 1.41
ZNF394Q53GI3 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC23.83■■□□□ 1.41
ZNF394Q53GI3 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC23.83■■□□□ 1.41
ZNF394Q53GI3 AC006455.2-201ENST00000429931 906 ntBASIC23.83■■□□□ 1.41
ZNF394Q53GI3 PEMT-206ENST00000435340 960 ntTSL 5 BASIC23.83■■□□□ 1.41
ZNF394Q53GI3 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC23.83■■□□□ 1.41
ZNF394Q53GI3 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC23.83■■□□□ 1.41
ZNF394Q53GI3 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
ZNF394Q53GI3 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
ZNF394Q53GI3 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
ZNF394Q53GI3 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
ZNF394Q53GI3 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
ZNF394Q53GI3 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC23.82■■□□□ 1.4
ZNF394Q53GI3 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
ZNF394Q53GI3 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
ZNF394Q53GI3 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC23.82■■□□□ 1.4
ZNF394Q53GI3 DUSP8P3-201ENST00000399571 1760 ntBASIC23.82■■□□□ 1.4
ZNF394Q53GI3 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
ZNF394Q53GI3 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC23.81■■□□□ 1.4
ZNF394Q53GI3 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
ZNF394Q53GI3 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
ZNF394Q53GI3 FP325331.1-202ENST00000623531 1380 ntBASIC23.81■■□□□ 1.4
ZNF394Q53GI3 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
ZNF394Q53GI3 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC23.81■■□□□ 1.4
ZNF394Q53GI3 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
ZNF394Q53GI3 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
ZNF394Q53GI3 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC23.81■■□□□ 1.4
ZNF394Q53GI3 AC009086.3-201ENST00000623486 1008 ntBASIC23.81■■□□□ 1.4
ZNF394Q53GI3 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC23.81■■□□□ 1.4
ZNF394Q53GI3 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC23.81■■□□□ 1.4
ZNF394Q53GI3 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
ZNF394Q53GI3 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
ZNF394Q53GI3 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC23.81■■□□□ 1.4
ZNF394Q53GI3 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
ZNF394Q53GI3 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
ZNF394Q53GI3 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
ZNF394Q53GI3 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
ZNF394Q53GI3 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC23.8■■□□□ 1.4
ZNF394Q53GI3 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
ZNF394Q53GI3 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
ZNF394Q53GI3 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC23.8■■□□□ 1.4
ZNF394Q53GI3 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
ZNF394Q53GI3 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC23.8■■□□□ 1.4
ZNF394Q53GI3 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC23.8■■□□□ 1.4
ZNF394Q53GI3 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC23.8■■□□□ 1.4
ZNF394Q53GI3 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC23.79■■□□□ 1.4
ZNF394Q53GI3 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC23.79■■□□□ 1.4
ZNF394Q53GI3 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC23.79■■□□□ 1.4
ZNF394Q53GI3 AC241377.3-202ENST00000626088 1088 ntBASIC23.79■■□□□ 1.4
ZNF394Q53GI3 AC241585.3-202ENST00000628937 1088 ntBASIC23.79■■□□□ 1.4
ZNF394Q53GI3 AC245100.8-202ENST00000629247 1058 ntBASIC23.79■■□□□ 1.4
ZNF394Q53GI3 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
ZNF394Q53GI3 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
ZNF394Q53GI3 RARA-203ENST00000394086 2008 ntTSL 2 BASIC23.79■■□□□ 1.4
ZNF394Q53GI3 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC23.79■■□□□ 1.4
ZNF394Q53GI3 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
ZNF394Q53GI3 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC23.79■■□□□ 1.4
ZNF394Q53GI3 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
ZNF394Q53GI3 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC23.78■■□□□ 1.4
ZNF394Q53GI3 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC23.78■■□□□ 1.4
ZNF394Q53GI3 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC23.78■■□□□ 1.4
ZNF394Q53GI3 DUX4L4-201ENST00000566884 1269 ntBASIC23.78■■□□□ 1.4
ZNF394Q53GI3 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC23.78■■□□□ 1.4
ZNF394Q53GI3 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
ZNF394Q53GI3 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
ZNF394Q53GI3 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
ZNF394Q53GI3 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC23.77■■□□□ 1.4
ZNF394Q53GI3 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC23.77■■□□□ 1.4
ZNF394Q53GI3 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC23.77■■□□□ 1.4
ZNF394Q53GI3 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 85.3 ms