Protein–RNA interactions for Protein: Q495M9

USH1G, Usher syndrome type-1G protein, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1GQ495M9 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
USH1GQ495M9 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC25.71■■□□□ 1.71
USH1GQ495M9 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.71
USH1GQ495M9 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC25.7■■□□□ 1.71
USH1GQ495M9 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC25.7■■□□□ 1.7
USH1GQ495M9 BX842568.3-201ENST00000418104 571 ntBASIC25.7■■□□□ 1.7
USH1GQ495M9 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC25.7■■□□□ 1.7
USH1GQ495M9 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC25.7■■□□□ 1.7
USH1GQ495M9 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC25.7■■□□□ 1.7
USH1GQ495M9 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC25.7■■□□□ 1.7
USH1GQ495M9 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC25.7■■□□□ 1.7
USH1GQ495M9 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC25.7■■□□□ 1.7
USH1GQ495M9 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
USH1GQ495M9 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
USH1GQ495M9 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC25.69■■□□□ 1.7
USH1GQ495M9 H19-210ENST00000439725 1929 ntTSL 2 BASIC25.69■■□□□ 1.7
USH1GQ495M9 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC25.69■■□□□ 1.7
USH1GQ495M9 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
USH1GQ495M9 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
USH1GQ495M9 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC25.69■■□□□ 1.7
USH1GQ495M9 SNX3-202ENST00000349379 890 ntTSL 2 BASIC25.69■■□□□ 1.7
USH1GQ495M9 SLC47A1P1-202ENST00000449666 945 ntBASIC25.69■■□□□ 1.7
USH1GQ495M9 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC25.69■■□□□ 1.7
USH1GQ495M9 AL499627.2-201ENST00000606283 725 ntBASIC25.69■■□□□ 1.7
USH1GQ495M9 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC25.69■■□□□ 1.7
USH1GQ495M9 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
USH1GQ495M9 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
USH1GQ495M9 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC25.68■■□□□ 1.7
USH1GQ495M9 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC25.68■■□□□ 1.7
USH1GQ495M9 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC25.68■■□□□ 1.7
USH1GQ495M9 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC25.68■■□□□ 1.7
USH1GQ495M9 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
USH1GQ495M9 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC25.68■■□□□ 1.7
USH1GQ495M9 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC25.68■■□□□ 1.7
USH1GQ495M9 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC25.68■■□□□ 1.7
USH1GQ495M9 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC25.68■■□□□ 1.7
USH1GQ495M9 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC25.68■■□□□ 1.7
USH1GQ495M9 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
USH1GQ495M9 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC25.67■■□□□ 1.7
USH1GQ495M9 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
USH1GQ495M9 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC25.67■■□□□ 1.7
USH1GQ495M9 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC25.67■■□□□ 1.7
USH1GQ495M9 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC25.67■■□□□ 1.7
USH1GQ495M9 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC25.67■■□□□ 1.7
USH1GQ495M9 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC25.67■■□□□ 1.7
USH1GQ495M9 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
USH1GQ495M9 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
USH1GQ495M9 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC25.67■■□□□ 1.7
USH1GQ495M9 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC25.66■■□□□ 1.7
USH1GQ495M9 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC25.66■■□□□ 1.7
USH1GQ495M9 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
USH1GQ495M9 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
USH1GQ495M9 GRAMD4P2-201ENST00000423297 1097 ntBASIC25.66■■□□□ 1.7
USH1GQ495M9 RBM38-205ENST00000440234 686 ntTSL 2 BASIC25.66■■□□□ 1.7
USH1GQ495M9 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC25.66■■□□□ 1.7
USH1GQ495M9 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
USH1GQ495M9 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
USH1GQ495M9 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
USH1GQ495M9 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC25.65■■□□□ 1.7
USH1GQ495M9 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC25.65■■□□□ 1.7
USH1GQ495M9 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
USH1GQ495M9 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC25.65■■□□□ 1.7
USH1GQ495M9 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
USH1GQ495M9 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
USH1GQ495M9 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC25.64■■□□□ 1.7
USH1GQ495M9 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC25.64■■□□□ 1.7
USH1GQ495M9 AC126544.1-201ENST00000580842 1059 ntBASIC25.64■■□□□ 1.7
USH1GQ495M9 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC25.64■■□□□ 1.7
USH1GQ495M9 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC25.64■■□□□ 1.69
USH1GQ495M9 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
USH1GQ495M9 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC25.64■■□□□ 1.69
USH1GQ495M9 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC25.64■■□□□ 1.69
USH1GQ495M9 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
USH1GQ495M9 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC25.64■■□□□ 1.69
USH1GQ495M9 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC25.64■■□□□ 1.69
USH1GQ495M9 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
USH1GQ495M9 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
USH1GQ495M9 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC25.63■■□□□ 1.69
USH1GQ495M9 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC25.63■■□□□ 1.69
USH1GQ495M9 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
USH1GQ495M9 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
USH1GQ495M9 AC010525.1-201ENST00000585559 441 ntBASIC25.63■■□□□ 1.69
USH1GQ495M9 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
USH1GQ495M9 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC25.63■■□□□ 1.69
USH1GQ495M9 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC25.63■■□□□ 1.69
USH1GQ495M9 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
USH1GQ495M9 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC25.62■■□□□ 1.69
USH1GQ495M9 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
USH1GQ495M9 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC25.62■■□□□ 1.69
USH1GQ495M9 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC25.62■■□□□ 1.69
USH1GQ495M9 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC25.62■■□□□ 1.69
USH1GQ495M9 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC25.62■■□□□ 1.69
USH1GQ495M9 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC25.61■■□□□ 1.69
USH1GQ495M9 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
USH1GQ495M9 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC25.61■■□□□ 1.69
USH1GQ495M9 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC25.61■■□□□ 1.69
USH1GQ495M9 RARRES2P6-201ENST00000567333 442 ntBASIC25.61■■□□□ 1.69
USH1GQ495M9 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC25.61■■□□□ 1.69
USH1GQ495M9 MPST-208ENST00000628507 698 ntTSL 5 BASIC25.61■■□□□ 1.69
USH1GQ495M9 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms