Protein–RNA interactions for Protein: Q2MKA7

RSPO1, R-spondin-1, humanhuman

Predicted RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO1Q2MKA7 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
RSPO1Q2MKA7 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RSPO1Q2MKA7 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC19.41■□□□□ 0.7
RSPO1Q2MKA7 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
RSPO1Q2MKA7 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RSPO1Q2MKA7 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC19.4■□□□□ 0.7
RSPO1Q2MKA7 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RSPO1Q2MKA7 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC19.4■□□□□ 0.7
RSPO1Q2MKA7 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RSPO1Q2MKA7 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC19.4■□□□□ 0.7
RSPO1Q2MKA7 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RSPO1Q2MKA7 C17orf82-201ENST00000623772 1530 ntBASIC19.4■□□□□ 0.7
RSPO1Q2MKA7 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RSPO1Q2MKA7 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
RSPO1Q2MKA7 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RSPO1Q2MKA7 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RSPO1Q2MKA7 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
RSPO1Q2MKA7 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
RSPO1Q2MKA7 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RSPO1Q2MKA7 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
RSPO1Q2MKA7 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
RSPO1Q2MKA7 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RSPO1Q2MKA7 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
RSPO1Q2MKA7 KRT16P3-201ENST00000439127 1283 ntBASIC19.39■□□□□ 0.69
RSPO1Q2MKA7 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC19.39■□□□□ 0.69
RSPO1Q2MKA7 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC19.39■□□□□ 0.69
RSPO1Q2MKA7 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
RSPO1Q2MKA7 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC19.39■□□□□ 0.69
RSPO1Q2MKA7 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC19.39■□□□□ 0.69
RSPO1Q2MKA7 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC19.39■□□□□ 0.69
RSPO1Q2MKA7 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
RSPO1Q2MKA7 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC19.39■□□□□ 0.69
RSPO1Q2MKA7 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC19.39■□□□□ 0.69
RSPO1Q2MKA7 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RSPO1Q2MKA7 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RSPO1Q2MKA7 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
RSPO1Q2MKA7 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
RSPO1Q2MKA7 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
RSPO1Q2MKA7 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC19.38■□□□□ 0.69
RSPO1Q2MKA7 TERT-206ENST00000508104 2486 ntTSL 5 BASIC19.38■□□□□ 0.69
RSPO1Q2MKA7 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC19.38■□□□□ 0.69
RSPO1Q2MKA7 DUX4L4-201ENST00000566884 1269 ntBASIC19.38■□□□□ 0.69
RSPO1Q2MKA7 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
RSPO1Q2MKA7 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RSPO1Q2MKA7 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RSPO1Q2MKA7 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RSPO1Q2MKA7 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC19.37■□□□□ 0.69
RSPO1Q2MKA7 AC233723.2-201ENST00000623798 2106 ntBASIC19.37■□□□□ 0.69
RSPO1Q2MKA7 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC19.37■□□□□ 0.69
RSPO1Q2MKA7 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
RSPO1Q2MKA7 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
RSPO1Q2MKA7 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RSPO1Q2MKA7 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RSPO1Q2MKA7 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
RSPO1Q2MKA7 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RSPO1Q2MKA7 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RSPO1Q2MKA7 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC19.37■□□□□ 0.69
RSPO1Q2MKA7 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RSPO1Q2MKA7 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
RSPO1Q2MKA7 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RSPO1Q2MKA7 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RSPO1Q2MKA7 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC19.36■□□□□ 0.69
RSPO1Q2MKA7 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RSPO1Q2MKA7 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC19.36■□□□□ 0.69
RSPO1Q2MKA7 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RSPO1Q2MKA7 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RSPO1Q2MKA7 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC19.36■□□□□ 0.69
RSPO1Q2MKA7 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RSPO1Q2MKA7 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RSPO1Q2MKA7 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RSPO1Q2MKA7 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RSPO1Q2MKA7 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RSPO1Q2MKA7 VGF-203ENST00000611537 1622 ntTSL 5 BASIC19.36■□□□□ 0.69
RSPO1Q2MKA7 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
RSPO1Q2MKA7 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RSPO1Q2MKA7 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RSPO1Q2MKA7 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
RSPO1Q2MKA7 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RSPO1Q2MKA7 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RSPO1Q2MKA7 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
RSPO1Q2MKA7 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC19.35■□□□□ 0.69
RSPO1Q2MKA7 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
RSPO1Q2MKA7 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RSPO1Q2MKA7 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC19.35■□□□□ 0.69
RSPO1Q2MKA7 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC19.35■□□□□ 0.69
RSPO1Q2MKA7 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RSPO1Q2MKA7 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RSPO1Q2MKA7 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
RSPO1Q2MKA7 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
RSPO1Q2MKA7 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RSPO1Q2MKA7 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RSPO1Q2MKA7 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RSPO1Q2MKA7 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
RSPO1Q2MKA7 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RSPO1Q2MKA7 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RSPO1Q2MKA7 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
RSPO1Q2MKA7 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
RSPO1Q2MKA7 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RSPO1Q2MKA7 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RSPO1Q2MKA7 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms