Protein–RNA interactions for Protein: Q08387

DNL4, DNA ligase 4, yeastyeast

Predicted RBP Predictions only

Length 944 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
DNL4Q08387 NNK1YKL171W 2787 nt4.48□□□□□ -1.69
DNL4Q08387 TRM11YOL124C 1302 nt4.47□□□□□ -1.69
DNL4Q08387 MCM2YBL023C 2607 nt4.47□□□□□ -1.69
DNL4Q08387 MCP2YLR253W 1710 nt4.47□□□□□ -1.69
DNL4Q08387 MSK1YNL073W 1731 nt4.47□□□□□ -1.69
DNL4Q08387 snR7-SsnR7-S 179 nt4.47□□□□□ -1.69
DNL4Q08387 RPS11AYDR025W 471 nt4.47□□□□□ -1.69
DNL4Q08387 GPP1YIL053W 753 nt4.47□□□□□ -1.69
DNL4Q08387 YPL014WYPL014W 1146 nt4.47□□□□□ -1.69
DNL4Q08387 FLC1YPL221W 2382 nt4.47□□□□□ -1.69
DNL4Q08387 WHI4YDL224C 1950 nt4.46□□□□□ -1.7
DNL4Q08387 YDR261C-DYDR261C-D 4815 nt4.46□□□□□ -1.7
DNL4Q08387 RPC53YDL150W 1269 nt4.46□□□□□ -1.7
DNL4Q08387 GCV1YDR019C 1203 nt4.46□□□□□ -1.7
DNL4Q08387 YDR445CYDR445C 408 nt4.46□□□□□ -1.7
DNL4Q08387 UTP11YKL099C 753 nt4.46□□□□□ -1.7
DNL4Q08387 YLR407WYLR407W 687 nt4.46□□□□□ -1.7
DNL4Q08387 YOL079WYOL079W 399 nt4.46□□□□□ -1.7
DNL4Q08387 YOR131CYOR131C 657 nt4.46□□□□□ -1.7
DNL4Q08387 DCS2YOR173W 1062 nt4.46□□□□□ -1.7
DNL4Q08387 YPR059CYPR059C 387 nt4.46□□□□□ -1.7
DNL4Q08387 SPC105YGL093W 2754 nt4.46□□□□□ -1.7
DNL4Q08387 VID28YIL017C 2766 nt4.46□□□□□ -1.7
DNL4Q08387 RKM2YDR198C 1440 nt4.46□□□□□ -1.7
DNL4Q08387 NUG1YER006W 1563 nt4.45□□□□□ -1.7
DNL4Q08387 RAD1YPL022W 3303 nt4.45□□□□□ -1.7
DNL4Q08387 ARG4YHR018C 1392 nt4.45□□□□□ -1.7
DNL4Q08387 YDL228CYDL228C 642 nt4.45□□□□□ -1.7
DNL4Q08387 tK(CUU)CtK(CUU)C 73 nt4.45□□□□□ -1.7
DNL4Q08387 tK(CUU)D1tK(CUU)D1 73 nt4.45□□□□□ -1.7
DNL4Q08387 tK(CUU)D2tK(CUU)D2 73 nt4.45□□□□□ -1.7
DNL4Q08387 tK(CUU)E1tK(CUU)E1 73 nt4.45□□□□□ -1.7
DNL4Q08387 tK(CUU)E2tK(CUU)E2 73 nt4.45□□□□□ -1.7
DNL4Q08387 tK(CUU)FtK(CUU)F 73 nt4.45□□□□□ -1.7
DNL4Q08387 tK(CUU)G1tK(CUU)G1 73 nt4.45□□□□□ -1.7
DNL4Q08387 tK(CUU)G2tK(CUU)G2 73 nt4.45□□□□□ -1.7
DNL4Q08387 tK(CUU)G3tK(CUU)G3 73 nt4.45□□□□□ -1.7
DNL4Q08387 tK(CUU)ItK(CUU)I 73 nt4.45□□□□□ -1.7
DNL4Q08387 tK(CUU)JtK(CUU)J 73 nt4.45□□□□□ -1.7
DNL4Q08387 tK(CUU)KtK(CUU)K 73 nt4.45□□□□□ -1.7
DNL4Q08387 tK(CUU)MtK(CUU)M 73 nt4.45□□□□□ -1.7
DNL4Q08387 tK(CUU)PtK(CUU)P 73 nt4.45□□□□□ -1.7
DNL4Q08387 YGL152CYGL152C 678 nt4.45□□□□□ -1.7
DNL4Q08387 EFB1YAL003W 621 nt4.45□□□□□ -1.7
DNL4Q08387 YJR038CYJR038C 363 nt4.45□□□□□ -1.7
DNL4Q08387 YMR082CYMR082C 357 nt4.45□□□□□ -1.7
DNL4Q08387 PRE2YPR103W 864 nt4.45□□□□□ -1.7
DNL4Q08387 KEX1YGL203C 2190 nt4.45□□□□□ -1.7
DNL4Q08387 EAR1YMR171C 1653 nt4.45□□□□□ -1.7
DNL4Q08387 YDL109CYDL109C 1944 nt4.44□□□□□ -1.7
DNL4Q08387 ACT1YFL039C 1128 nt4.44□□□□□ -1.7
DNL4Q08387 AAD6YFL056C 639 nt4.44□□□□□ -1.7
DNL4Q08387 ARC1YGL105W 1131 nt4.44□□□□□ -1.7
DNL4Q08387 RPL8AYHL033C 771 nt4.44□□□□□ -1.7
DNL4Q08387 GRE3YHR104W 984 nt4.44□□□□□ -1.7
DNL4Q08387 MAP1YLR244C 1164 nt4.44□□□□□ -1.7
DNL4Q08387 OSH2YDL019C 3852 nt4.44□□□□□ -1.7
DNL4Q08387 DIP2YLR129W 2832 nt4.44□□□□□ -1.7
DNL4Q08387 DXO1YDR370C 1329 nt4.44□□□□□ -1.7
DNL4Q08387 SEO1YAL067C 1782 nt4.43□□□□□ -1.7
DNL4Q08387 RRP1YDR087C 837 nt4.43□□□□□ -1.7
DNL4Q08387 YDR246W-AYDR246W-A 201 nt4.43□□□□□ -1.7
DNL4Q08387 BUD16YEL029C 939 nt4.43□□□□□ -1.7
DNL4Q08387 LOH1YJL038C 660 nt4.43□□□□□ -1.7
DNL4Q08387 UIP3YAR027W 708 nt4.43□□□□□ -1.7
DNL4Q08387 YPL071CYPL071C 471 nt4.43□□□□□ -1.7
DNL4Q08387 COA2YPL189C-A 207 nt4.43□□□□□ -1.7
DNL4Q08387 DSS4YPR017C 432 nt4.43□□□□□ -1.7
DNL4Q08387 SRB6YBR253W 366 nt4.43□□□□□ -1.7
DNL4Q08387 MET17YLR303W 1335 nt4.43□□□□□ -1.7
DNL4Q08387 TOG1YER184C 2385 nt4.42□□□□□ -1.7
DNL4Q08387 PER1YCR044C 1074 nt4.42□□□□□ -1.7
DNL4Q08387 OCA4YCR095C 1089 nt4.42□□□□□ -1.7
DNL4Q08387 ATP5YDR298C 639 nt4.42□□□□□ -1.7
DNL4Q08387 FBP1YLR377C 1047 nt4.42□□□□□ -1.7
DNL4Q08387 YOR289WYOR289W 756 nt4.42□□□□□ -1.7
DNL4Q08387 RET3YPL010W 570 nt4.42□□□□□ -1.7
DNL4Q08387 YBR196C-BYBR196C-B 105 nt4.42□□□□□ -1.7
DNL4Q08387 SMF1YOL122C 1728 nt4.41□□□□□ -1.7
DNL4Q08387 MUM3YOR298W 1440 nt4.41□□□□□ -1.7
DNL4Q08387 IMA3YIL172C 1770 nt4.41□□□□□ -1.7
DNL4Q08387 IMA4YJL221C 1770 nt4.41□□□□□ -1.7
DNL4Q08387 SKI8YGL213C 1194 nt4.41□□□□□ -1.7
DNL4Q08387 YIL171WYIL171W 330 nt4.41□□□□□ -1.7
DNL4Q08387 CDC42YLR229C 576 nt4.41□□□□□ -1.7
DNL4Q08387 ISR1YPR106W 1332 nt4.41□□□□□ -1.7
DNL4Q08387 KRE29YER038C 1395 nt4.4□□□□□ -1.7
DNL4Q08387 NTA1YJR062C 1374 nt4.4□□□□□ -1.7
DNL4Q08387 RAD52YML032C 1416 nt4.4□□□□□ -1.7
DNL4Q08387 STB2YMR053C 2553 nt4.4□□□□□ -1.7
DNL4Q08387 PTC1YDL006W 846 nt4.4□□□□□ -1.71
DNL4Q08387 UBC1YDR177W 648 nt4.4□□□□□ -1.71
DNL4Q08387 CDC12YHR107C 1224 nt4.4□□□□□ -1.71
DNL4Q08387 YLR036CYLR036C 612 nt4.4□□□□□ -1.71
DNL4Q08387 RPS0BYLR048W 759 nt4.4□□□□□ -1.71
DNL4Q08387 YLR125WYLR125W 411 nt4.4□□□□□ -1.71
DNL4Q08387 CUS2YNL286W 858 nt4.4□□□□□ -1.71
DNL4Q08387 ARC40YBR234C 1155 nt4.4□□□□□ -1.71
DNL4Q08387 KCC4YCL024W 3114 nt4.39□□□□□ -1.71
DNL4Q08387 ADP1YCR011C 3150 nt4.39□□□□□ -1.71
Retrieved 100 of 7,029 protein–RNA pairs in 31.7 ms