Protein–RNA interactions for Protein: Q04781

RKR1, E3 ubiquitin-protein ligase listerin, yeastyeast

Predictions only

Length 1,562 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RKR1Q04781 YPP1YGR198W 2454 nt5.69□□□□□ -1.5
RKR1Q04781 NSA2YER126C 786 nt5.69□□□□□ -1.5
RKR1Q04781 MTD1YKR080W 963 nt5.69□□□□□ -1.5
RKR1Q04781 GAL4YPL248C 2646 nt5.69□□□□□ -1.5
RKR1Q04781 ARN2YHL047C 1863 nt5.69□□□□□ -1.5
RKR1Q04781 CDC45YLR103C 1953 nt5.69□□□□□ -1.5
RKR1Q04781 YHR212W-AYHR212W-A 204 nt5.68□□□□□ -1.5
RKR1Q04781 AHP1YLR109W 531 nt5.68□□□□□ -1.5
RKR1Q04781 YAR061WYAR061W 204 nt5.68□□□□□ -1.5
RKR1Q04781 PMT2YAL023C 2280 nt5.68□□□□□ -1.5
RKR1Q04781 STE23YLR389C 3084 nt5.67□□□□□ -1.5
RKR1Q04781 PTM1YKL039W 1572 nt5.67□□□□□ -1.5
RKR1Q04781 VPS73YGL104C 1461 nt5.67□□□□□ -1.5
RKR1Q04781 TOG1YER184C 2385 nt5.66□□□□□ -1.5
RKR1Q04781 CST6YIL036W 1764 nt5.66□□□□□ -1.5
RKR1Q04781 FDH1YOR388C 1131 nt5.65□□□□□ -1.5
RKR1Q04781 FDH2YPL275W 711 nt5.65□□□□□ -1.5
RKR1Q04781 BUD14YAR014C 2130 nt5.65□□□□□ -1.51
RKR1Q04781 RRN6YBL014C 2685 nt5.65□□□□□ -1.51
RKR1Q04781 URA3YEL021W 804 nt5.64□□□□□ -1.51
RKR1Q04781 TMA19YKL056C 504 nt5.64□□□□□ -1.51
RKR1Q04781 RPS1BYML063W 768 nt5.64□□□□□ -1.51
RKR1Q04781 DBP10YDL031W 2988 nt5.64□□□□□ -1.51
RKR1Q04781 DIN7YDR263C 1293 nt5.63□□□□□ -1.51
RKR1Q04781 PHA2YNL316C 1005 nt5.63□□□□□ -1.51
RKR1Q04781 PWR1PWR1 941 nt5.63□□□□□ -1.51
RKR1Q04781 PDR12YPL058C 4536 nt5.63□□□□□ -1.51
RKR1Q04781 MSD1YPL104W 1977 nt5.63□□□□□ -1.51
RKR1Q04781 RFC3YNL290W 1023 nt5.63□□□□□ -1.51
RKR1Q04781 UPS3YDR185C 540 nt5.62□□□□□ -1.51
RKR1Q04781 GTF1YGR102C 552 nt5.62□□□□□ -1.51
RKR1Q04781 YMR122W-AYMR122W-A 255 nt5.62□□□□□ -1.51
RKR1Q04781 RNR1YER070W 2667 nt5.61□□□□□ -1.51
RKR1Q04781 YER076CYER076C 909 nt5.61□□□□□ -1.51
RKR1Q04781 ECM4YKR076W 1113 nt5.61□□□□□ -1.51
RKR1Q04781 SHE1YBL031W 1017 nt5.61□□□□□ -1.51
RKR1Q04781 MDJ2YNL328C 441 nt5.61□□□□□ -1.51
RKR1Q04781 PMT6YGR199W 2280 nt5.6□□□□□ -1.51
RKR1Q04781 YFR035CYFR035C 345 nt5.6□□□□□ -1.51
RKR1Q04781 PRE9YGR135W 777 nt5.6□□□□□ -1.51
RKR1Q04781 YBL059WYBL059W 582 nt5.6□□□□□ -1.51
RKR1Q04781 PAN1YIR006C 4443 nt5.6□□□□□ -1.51
RKR1Q04781 HSP82YPL240C 2130 nt5.6□□□□□ -1.51
RKR1Q04781 SRB6YBR253W 366 nt5.59□□□□□ -1.51
RKR1Q04781 ZRC1YMR243C 1329 nt5.59□□□□□ -1.51
RKR1Q04781 ALR2YFL050C 2577 nt5.59□□□□□ -1.51
RKR1Q04781 OPI6YDL096C 327 nt5.59□□□□□ -1.52
RKR1Q04781 RPB3YIL021W 957 nt5.59□□□□□ -1.52
RKR1Q04781 YCF1YDR135C 4548 nt5.58□□□□□ -1.52
RKR1Q04781 DUR1,2YBR208C 5508 nt5.58□□□□□ -1.52
RKR1Q04781 TRX3YCR083W 384 nt5.58□□□□□ -1.52
RKR1Q04781 MBB1YJL199C 327 nt5.58□□□□□ -1.52
RKR1Q04781 YLR012CYLR012C 300 nt5.58□□□□□ -1.52
RKR1Q04781 MAP1YLR244C 1164 nt5.58□□□□□ -1.52
RKR1Q04781 MSC7YHR039C 1935 nt5.58□□□□□ -1.52
RKR1Q04781 PIM1YBL022C 3402 nt5.58□□□□□ -1.52
RKR1Q04781 RPN2YIL075C 2838 nt5.57□□□□□ -1.52
RKR1Q04781 VAC8YEL013W 1737 nt5.57□□□□□ -1.52
RKR1Q04781 TOS3YGL179C 1683 nt5.57□□□□□ -1.52
RKR1Q04781 YOR073W-AYOR073W-A 234 nt5.57□□□□□ -1.52
RKR1Q04781 AIM3YBR108W 2844 nt5.57□□□□□ -1.52
RKR1Q04781 PRP19YLL036C 1512 nt5.56□□□□□ -1.52
RKR1Q04781 ADD66YKL206C 804 nt5.56□□□□□ -1.52
RKR1Q04781 PKH1YDR490C 2301 nt5.55□□□□□ -1.52
RKR1Q04781 ARC15YIL062C 465 nt5.55□□□□□ -1.52
RKR1Q04781 IRC9YJL142C 393 nt5.55□□□□□ -1.52
RKR1Q04781 OAF1YAL051W 3144 nt5.55□□□□□ -1.52
RKR1Q04781 THI7YLR237W 1797 nt5.55□□□□□ -1.52
RKR1Q04781 RSC1YGR056W 2787 nt5.55□□□□□ -1.52
RKR1Q04781 RPL8AYHL033C 771 nt5.55□□□□□ -1.52
RKR1Q04781 APE1YKL103C 1545 nt5.54□□□□□ -1.52
RKR1Q04781 SIT1YEL065W 1887 nt5.53□□□□□ -1.52
RKR1Q04781 CDS1YBR029C 1374 nt5.53□□□□□ -1.52
RKR1Q04781 HIM1YDR317W 1245 nt5.53□□□□□ -1.52
RKR1Q04781 PPX1YHR201C 1194 nt5.53□□□□□ -1.52
RKR1Q04781 CDC8YJR057W 651 nt5.53□□□□□ -1.52
RKR1Q04781 RNH203YLR154C 333 nt5.53□□□□□ -1.52
RKR1Q04781 CKS1YBR135W 453 nt5.53□□□□□ -1.52
RKR1Q04781 ECM22YLR228C 2445 nt5.53□□□□□ -1.52
RKR1Q04781 PFA4YOL003C 1137 nt5.52□□□□□ -1.53
RKR1Q04781 CKA2YOR061W 1020 nt5.52□□□□□ -1.53
RKR1Q04781 FSH3YOR280C 801 nt5.52□□□□□ -1.53
RKR1Q04781 CYK3YDL117W 2658 nt5.52□□□□□ -1.53
RKR1Q04781 DAM1YGR113W 1032 nt5.51□□□□□ -1.53
RKR1Q04781 AKR1YDR264C 2295 nt5.51□□□□□ -1.53
RKR1Q04781 SHQ1YIL104C 1524 nt5.51□□□□□ -1.53
RKR1Q04781 YGR051CYGR051C 324 nt5.5□□□□□ -1.53
RKR1Q04781 FAA1YOR317W 2103 nt5.5□□□□□ -1.53
RKR1Q04781 PEX19YDL065C 1029 nt5.5□□□□□ -1.53
RKR1Q04781 DTD1YDL219W 453 nt5.5□□□□□ -1.53
RKR1Q04781 YGL218WYGL218W 651 nt5.5□□□□□ -1.53
RKR1Q04781 BNA5YLR231C 1362 nt5.49□□□□□ -1.53
RKR1Q04781 GDE1YPL110C 3672 nt5.49□□□□□ -1.53
RKR1Q04781 UBX5YDR330W 1503 nt5.49□□□□□ -1.53
RKR1Q04781 RRP17YDR412W 708 nt5.49□□□□□ -1.53
RKR1Q04781 DER1YBR201W 636 nt5.49□□□□□ -1.53
RKR1Q04781 STP22YCL008C 1158 nt5.49□□□□□ -1.53
RKR1Q04781 YER034WYER034W 558 nt5.48□□□□□ -1.53
RKR1Q04781 APC9YLR102C 798 nt5.48□□□□□ -1.53
RKR1Q04781 RPA43YOR340C 981 nt5.48□□□□□ -1.53
Retrieved 100 of 7,029 protein–RNA pairs in 24.3 ms