Protein–RNA interactions for Protein: P78334

GABRE, Gamma-aminobutyric acid receptor subunit epsilon, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABREP78334 AC010525.1-201ENST00000585559 441 ntBASIC21.32■■□□□ 1
GABREP78334 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC21.32■■□□□ 1
GABREP78334 HLA-L-211ENST00000482052 1765 ntBASIC21.32■■□□□ 1
GABREP78334 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
GABREP78334 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
GABREP78334 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
GABREP78334 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
GABREP78334 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC21.31■■□□□ 1
GABREP78334 LHPP-203ENST00000392757 840 ntTSL 3 BASIC21.31■■□□□ 1
GABREP78334 NT5C3AP1-201ENST00000394500 1012 ntBASIC21.31■■□□□ 1
GABREP78334 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC21.31■■□□□ 1
GABREP78334 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
GABREP78334 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC21.31■■□□□ 1
GABREP78334 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC21.31■■□□□ 1
GABREP78334 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC21.3■■□□□ 1
GABREP78334 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC21.3■■□□□ 1
GABREP78334 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
GABREP78334 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
GABREP78334 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC21.3■■□□□ 1
GABREP78334 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
GABREP78334 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC21.3■■□□□ 1
GABREP78334 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC21.3■■□□□ 1
GABREP78334 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC21.3■■□□□ 1
GABREP78334 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
GABREP78334 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
GABREP78334 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
GABREP78334 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
GABREP78334 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC21.29■■□□□ 1
GABREP78334 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC21.29■■□□□ 1
GABREP78334 MPST-204ENST00000404393 1329 ntTSL 5 BASIC21.29■■□□□ 1
GABREP78334 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
GABREP78334 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
GABREP78334 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC21.28■■□□□ 1
GABREP78334 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC21.28■■□□□ 1
GABREP78334 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
GABREP78334 OR2I1P-207ENST00000453522 948 ntBASIC21.28■■□□□ 1
GABREP78334 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC21.28■■□□□ 1
GABREP78334 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC21.28■■□□□ 1
GABREP78334 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
GABREP78334 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
GABREP78334 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
GABREP78334 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC21.28■■□□□ 1
GABREP78334 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
GABREP78334 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
GABREP78334 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
GABREP78334 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
GABREP78334 EI24-204ENST00000527235 1625 ntTSL 5 BASIC21.27■■□□□ 1
GABREP78334 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
GABREP78334 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
GABREP78334 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC21.27■■□□□ 1
GABREP78334 AL499627.2-201ENST00000606283 725 ntBASIC21.27■■□□□ 1
GABREP78334 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
GABREP78334 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC21.27■■□□□ 1
GABREP78334 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
GABREP78334 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC21.27■■□□□ 1
GABREP78334 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
GABREP78334 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
GABREP78334 AC020928.2-201ENST00000588717 2197 ntBASIC21.27■■□□□ 1
GABREP78334 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
GABREP78334 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■□□□□ 0.99
GABREP78334 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
GABREP78334 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
GABREP78334 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
GABREP78334 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
GABREP78334 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC21.26■□□□□ 0.99
GABREP78334 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
GABREP78334 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
GABREP78334 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC21.26■□□□□ 0.99
GABREP78334 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
GABREP78334 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
GABREP78334 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
GABREP78334 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
GABREP78334 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC21.26■□□□□ 0.99
GABREP78334 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
GABREP78334 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
GABREP78334 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
GABREP78334 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC21.25■□□□□ 0.99
GABREP78334 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC21.25■□□□□ 0.99
GABREP78334 TK2-208ENST00000545043 1120 ntTSL 2 BASIC21.25■□□□□ 0.99
GABREP78334 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
GABREP78334 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
GABREP78334 AC080038.1-201ENST00000611274 1154 ntBASIC21.25■□□□□ 0.99
GABREP78334 AC105233.4-201ENST00000642045 216 ntBASIC21.25■□□□□ 0.99
GABREP78334 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
GABREP78334 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
GABREP78334 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC21.25■□□□□ 0.99
GABREP78334 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
GABREP78334 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC21.24■□□□□ 0.99
GABREP78334 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
GABREP78334 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC21.24■□□□□ 0.99
GABREP78334 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC21.24■□□□□ 0.99
GABREP78334 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC21.24■□□□□ 0.99
GABREP78334 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC21.24■□□□□ 0.99
GABREP78334 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC21.24■□□□□ 0.99
GABREP78334 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC21.24■□□□□ 0.99
GABREP78334 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC21.24■□□□□ 0.99
GABREP78334 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
GABREP78334 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
GABREP78334 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
GABREP78334 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC21.23■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms