Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
SPCS3P61009 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SPCS3P61009 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SPCS3P61009 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SPCS3P61009 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SPCS3P61009 TERT-206ENST00000508104 2486 ntTSL 5 BASIC18.05■□□□□ 0.48
SPCS3P61009 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC18.05■□□□□ 0.48
SPCS3P61009 RARRES2P2-201ENST00000394842 485 ntBASIC18.05■□□□□ 0.48
SPCS3P61009 U85056.1-201ENST00000616429 682 ntBASIC18.05■□□□□ 0.48
SPCS3P61009 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SPCS3P61009 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SPCS3P61009 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SPCS3P61009 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SPCS3P61009 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
SPCS3P61009 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SPCS3P61009 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SPCS3P61009 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
SPCS3P61009 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SPCS3P61009 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SPCS3P61009 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SPCS3P61009 MTX2-204ENST00000443241 799 ntTSL 3 BASIC18.04■□□□□ 0.48
SPCS3P61009 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC18.04■□□□□ 0.48
SPCS3P61009 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
SPCS3P61009 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SPCS3P61009 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SPCS3P61009 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
SPCS3P61009 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SPCS3P61009 LSR-203ENST00000360798 1963 ntTSL 2 BASIC18.03■□□□□ 0.48
SPCS3P61009 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SPCS3P61009 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
SPCS3P61009 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC18.03■□□□□ 0.48
SPCS3P61009 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC18.03■□□□□ 0.48
SPCS3P61009 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC18.03■□□□□ 0.48
SPCS3P61009 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
SPCS3P61009 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SPCS3P61009 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SPCS3P61009 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
SPCS3P61009 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
SPCS3P61009 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SPCS3P61009 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC18.03■□□□□ 0.48
SPCS3P61009 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SPCS3P61009 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SPCS3P61009 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
SPCS3P61009 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC18.02■□□□□ 0.48
SPCS3P61009 COMT-203ENST00000403184 2217 ntTSL 2 BASIC18.02■□□□□ 0.48
SPCS3P61009 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
SPCS3P61009 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
SPCS3P61009 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
SPCS3P61009 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
SPCS3P61009 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
SPCS3P61009 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC18.02■□□□□ 0.47
SPCS3P61009 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
SPCS3P61009 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC18.02■□□□□ 0.47
SPCS3P61009 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC18.01■□□□□ 0.47
SPCS3P61009 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC18.01■□□□□ 0.47
SPCS3P61009 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SPCS3P61009 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC18.01■□□□□ 0.47
SPCS3P61009 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SPCS3P61009 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SPCS3P61009 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SPCS3P61009 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SPCS3P61009 AC242852.2-201ENST00000615738 1807 ntBASIC18.01■□□□□ 0.47
SPCS3P61009 AC079630.1-202ENST00000618127 1840 ntBASIC18.01■□□□□ 0.47
SPCS3P61009 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SPCS3P61009 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC18.01■□□□□ 0.47
SPCS3P61009 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
SPCS3P61009 AC139795.1-202ENST00000500444 432 ntBASIC18.01■□□□□ 0.47
SPCS3P61009 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
SPCS3P61009 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SPCS3P61009 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SPCS3P61009 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC18.01■□□□□ 0.47
SPCS3P61009 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SPCS3P61009 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SPCS3P61009 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC18■□□□□ 0.47
SPCS3P61009 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
SPCS3P61009 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SPCS3P61009 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
SPCS3P61009 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SPCS3P61009 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SPCS3P61009 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC18■□□□□ 0.47
SPCS3P61009 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC18■□□□□ 0.47
SPCS3P61009 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SPCS3P61009 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
SPCS3P61009 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC18■□□□□ 0.47
SPCS3P61009 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC18■□□□□ 0.47
SPCS3P61009 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SPCS3P61009 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SPCS3P61009 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SPCS3P61009 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC17.99■□□□□ 0.47
SPCS3P61009 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC17.99■□□□□ 0.47
SPCS3P61009 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SPCS3P61009 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
SPCS3P61009 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC17.99■□□□□ 0.47
SPCS3P61009 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
SPCS3P61009 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
SPCS3P61009 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
SPCS3P61009 KRT18P60-201ENST00000312876 1297 ntBASIC17.99■□□□□ 0.47
SPCS3P61009 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC17.99■□□□□ 0.47
SPCS3P61009 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC17.99■□□□□ 0.47
SPCS3P61009 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC17.99■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms