Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
VSX2P58304 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
VSX2P58304 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC21.33■■□□□ 1.01
VSX2P58304 PTMA-205ENST00000410064 814 ntTSL 2 BASIC21.33■■□□□ 1.01
VSX2P58304 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
VSX2P58304 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
VSX2P58304 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC21.33■■□□□ 1.01
VSX2P58304 GTSE1-AS1-202ENST00000623117 1518 ntBASIC21.33■■□□□ 1
VSX2P58304 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC21.33■■□□□ 1
VSX2P58304 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC21.32■■□□□ 1
VSX2P58304 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
VSX2P58304 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
VSX2P58304 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
VSX2P58304 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC21.32■■□□□ 1
VSX2P58304 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
VSX2P58304 HES6-206ENST00000409574 738 ntTSL 2 BASIC21.32■■□□□ 1
VSX2P58304 AL138724.1-201ENST00000606771 1088 ntBASIC21.32■■□□□ 1
VSX2P58304 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
VSX2P58304 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC21.32■■□□□ 1
VSX2P58304 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
VSX2P58304 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC21.32■■□□□ 1
VSX2P58304 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC21.32■■□□□ 1
VSX2P58304 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC21.32■■□□□ 1
VSX2P58304 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC21.31■■□□□ 1
VSX2P58304 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
VSX2P58304 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
VSX2P58304 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC21.31■■□□□ 1
VSX2P58304 AC133561.4-201ENST00000566112 224 ntBASIC21.31■■□□□ 1
VSX2P58304 DUX4L4-201ENST00000566884 1269 ntBASIC21.31■■□□□ 1
VSX2P58304 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC21.31■■□□□ 1
VSX2P58304 MIR4767-201ENST00000582827 78 ntBASIC21.31■■□□□ 1
VSX2P58304 AC005837.3-201ENST00000612163 286 ntBASIC21.31■■□□□ 1
VSX2P58304 AC011298.3-201ENST00000615796 283 ntBASIC21.31■■□□□ 1
VSX2P58304 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC21.31■■□□□ 1
VSX2P58304 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
VSX2P58304 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC21.3■■□□□ 1
VSX2P58304 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
VSX2P58304 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC21.3■■□□□ 1
VSX2P58304 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC21.3■■□□□ 1
VSX2P58304 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC21.3■■□□□ 1
VSX2P58304 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC21.3■■□□□ 1
VSX2P58304 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
VSX2P58304 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
VSX2P58304 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
VSX2P58304 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC21.3■■□□□ 1
VSX2P58304 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC21.3■■□□□ 1
VSX2P58304 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
VSX2P58304 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
VSX2P58304 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
VSX2P58304 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
VSX2P58304 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
VSX2P58304 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
VSX2P58304 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC21.29■■□□□ 1
VSX2P58304 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC21.29■■□□□ 1
VSX2P58304 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
VSX2P58304 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC21.29■■□□□ 1
VSX2P58304 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC21.29■■□□□ 1
VSX2P58304 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
VSX2P58304 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
VSX2P58304 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC21.29■■□□□ 1
VSX2P58304 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC21.29■■□□□ 1
VSX2P58304 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
VSX2P58304 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
VSX2P58304 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
VSX2P58304 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC21.28■■□□□ 1
VSX2P58304 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC21.28■■□□□ 1
VSX2P58304 ANOS2P-203ENST00000472227 1816 ntBASIC21.28■■□□□ 1
VSX2P58304 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
VSX2P58304 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC21.28■■□□□ 1
VSX2P58304 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC21.28■■□□□ 1
VSX2P58304 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
VSX2P58304 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC21.27■■□□□ 1
VSX2P58304 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC21.27■■□□□ 1
VSX2P58304 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
VSX2P58304 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
VSX2P58304 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC21.27■■□□□ 1
VSX2P58304 GRAMD4P4-201ENST00000613563 1115 ntBASIC21.27■■□□□ 1
VSX2P58304 AC136469.2-201ENST00000623944 1028 ntBASIC21.27■■□□□ 1
VSX2P58304 AL353803.4-201ENST00000565882 1934 ntBASIC21.27■■□□□ 1
VSX2P58304 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
VSX2P58304 AC019069.1-201ENST00000610008 1333 ntBASIC21.27■□□□□ 0.99
VSX2P58304 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC21.27■□□□□ 0.99
VSX2P58304 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC21.26■□□□□ 0.99
VSX2P58304 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
VSX2P58304 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
VSX2P58304 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
VSX2P58304 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
VSX2P58304 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC21.26■□□□□ 0.99
VSX2P58304 EDA-201ENST00000338901 1233 ntBASIC21.26■□□□□ 0.99
VSX2P58304 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
VSX2P58304 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
VSX2P58304 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC21.26■□□□□ 0.99
VSX2P58304 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC21.26■□□□□ 0.99
VSX2P58304 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC21.26■□□□□ 0.99
VSX2P58304 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC21.26■□□□□ 0.99
VSX2P58304 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC21.26■□□□□ 0.99
VSX2P58304 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
VSX2P58304 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
VSX2P58304 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
VSX2P58304 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC21.26■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms