Protein–RNA interactions for Protein: P57729

RAB38, Ras-related protein Rab-38, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB38P57729 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
RAB38P57729 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC21.02■□□□□ 0.96
RAB38P57729 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
RAB38P57729 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
RAB38P57729 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC21.02■□□□□ 0.96
RAB38P57729 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
RAB38P57729 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
RAB38P57729 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC21.02■□□□□ 0.96
RAB38P57729 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC21.02■□□□□ 0.96
RAB38P57729 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC21.02■□□□□ 0.96
RAB38P57729 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RAB38P57729 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC21.02■□□□□ 0.96
RAB38P57729 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
RAB38P57729 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.95
RAB38P57729 SYT6-210ENST00000641643 1587 ntBASIC21.02■□□□□ 0.95
RAB38P57729 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
RAB38P57729 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC21.01■□□□□ 0.95
RAB38P57729 GTSE1-AS1-202ENST00000623117 1518 ntBASIC21.01■□□□□ 0.95
RAB38P57729 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
RAB38P57729 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RAB38P57729 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC21.01■□□□□ 0.95
RAB38P57729 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC21.01■□□□□ 0.95
RAB38P57729 pRNA.6-201ENST00000610482 90 ntBASIC21.01■□□□□ 0.95
RAB38P57729 pRNA.5-201ENST00000612139 90 ntBASIC21.01■□□□□ 0.95
RAB38P57729 pRNA.11-201ENST00000618423 90 ntBASIC21.01■□□□□ 0.95
RAB38P57729 pRNA.13-201ENST00000619112 90 ntBASIC21.01■□□□□ 0.95
RAB38P57729 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC21.01■□□□□ 0.95
RAB38P57729 DUSP8P5-201ENST00000422884 1815 ntBASIC21.01■□□□□ 0.95
RAB38P57729 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
RAB38P57729 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
RAB38P57729 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RAB38P57729 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
RAB38P57729 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RAB38P57729 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
RAB38P57729 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
RAB38P57729 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC21■□□□□ 0.95
RAB38P57729 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC21■□□□□ 0.95
RAB38P57729 NFE2L3P1-201ENST00000588207 1959 ntBASIC21■□□□□ 0.95
RAB38P57729 PTCHD3P2-201ENST00000424937 1205 ntBASIC21■□□□□ 0.95
RAB38P57729 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RAB38P57729 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC21■□□□□ 0.95
RAB38P57729 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC21■□□□□ 0.95
RAB38P57729 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC21■□□□□ 0.95
RAB38P57729 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RAB38P57729 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RAB38P57729 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RAB38P57729 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RAB38P57729 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
RAB38P57729 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
RAB38P57729 SERBP1P1-201ENST00000396021 1160 ntBASIC20.99■□□□□ 0.95
RAB38P57729 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC20.99■□□□□ 0.95
RAB38P57729 AL499627.2-201ENST00000606283 725 ntBASIC20.99■□□□□ 0.95
RAB38P57729 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC20.99■□□□□ 0.95
RAB38P57729 SF1-220ENST00000626028 704 ntTSL 2 BASIC20.99■□□□□ 0.95
RAB38P57729 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
RAB38P57729 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC20.98■□□□□ 0.95
RAB38P57729 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
RAB38P57729 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC20.98■□□□□ 0.95
RAB38P57729 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RAB38P57729 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RAB38P57729 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RAB38P57729 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC20.98■□□□□ 0.95
RAB38P57729 AL138724.1-201ENST00000606771 1088 ntBASIC20.98■□□□□ 0.95
RAB38P57729 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
RAB38P57729 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC20.98■□□□□ 0.95
RAB38P57729 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC20.97■□□□□ 0.95
RAB38P57729 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RAB38P57729 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RAB38P57729 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RAB38P57729 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RAB38P57729 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RAB38P57729 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RAB38P57729 UNC93B3-201ENST00000308076 687 ntBASIC20.97■□□□□ 0.95
RAB38P57729 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RAB38P57729 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC20.97■□□□□ 0.95
RAB38P57729 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RAB38P57729 MIR3181-201ENST00000578512 73 ntBASIC20.97■□□□□ 0.95
RAB38P57729 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC20.97■□□□□ 0.95
RAB38P57729 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RAB38P57729 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
RAB38P57729 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC20.97■□□□□ 0.95
RAB38P57729 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC20.96■□□□□ 0.95
RAB38P57729 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
RAB38P57729 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RAB38P57729 AC096631.2-201ENST00000436136 790 ntBASIC20.96■□□□□ 0.95
RAB38P57729 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC20.96■□□□□ 0.95
RAB38P57729 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC20.96■□□□□ 0.95
RAB38P57729 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC20.96■□□□□ 0.95
RAB38P57729 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RAB38P57729 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
RAB38P57729 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RAB38P57729 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC20.95■□□□□ 0.94
RAB38P57729 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RAB38P57729 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RAB38P57729 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RAB38P57729 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
RAB38P57729 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
RAB38P57729 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC20.95■□□□□ 0.94
RAB38P57729 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
RAB38P57729 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC20.95■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms