Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC20.25■□□□□ 0.83
SUMO3P55854 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SUMO3P55854 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC20.25■□□□□ 0.83
SUMO3P55854 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SUMO3P55854 DUX4L19-201ENST00000557448 1267 ntBASIC20.25■□□□□ 0.83
SUMO3P55854 AC099791.2-201ENST00000605725 427 ntBASIC20.25■□□□□ 0.83
SUMO3P55854 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC20.25■□□□□ 0.83
SUMO3P55854 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC20.25■□□□□ 0.83
SUMO3P55854 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SUMO3P55854 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
SUMO3P55854 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
SUMO3P55854 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SUMO3P55854 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC20.24■□□□□ 0.83
SUMO3P55854 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SUMO3P55854 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
SUMO3P55854 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC20.24■□□□□ 0.83
SUMO3P55854 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SUMO3P55854 AL499627.2-201ENST00000606283 725 ntBASIC20.24■□□□□ 0.83
SUMO3P55854 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
SUMO3P55854 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SUMO3P55854 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC20.24■□□□□ 0.83
SUMO3P55854 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SUMO3P55854 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SUMO3P55854 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC20.23■□□□□ 0.83
SUMO3P55854 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC20.23■□□□□ 0.83
SUMO3P55854 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SUMO3P55854 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SUMO3P55854 AL136116.3-201ENST00000402907 1138 ntBASIC20.23■□□□□ 0.83
SUMO3P55854 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SUMO3P55854 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC20.23■□□□□ 0.83
SUMO3P55854 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC20.23■□□□□ 0.83
SUMO3P55854 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SUMO3P55854 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC20.23■□□□□ 0.83
SUMO3P55854 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC20.23■□□□□ 0.83
SUMO3P55854 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
SUMO3P55854 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SUMO3P55854 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SUMO3P55854 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SUMO3P55854 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
SUMO3P55854 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC20.22■□□□□ 0.83
SUMO3P55854 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SUMO3P55854 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC20.22■□□□□ 0.83
SUMO3P55854 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC20.22■□□□□ 0.83
SUMO3P55854 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
SUMO3P55854 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SUMO3P55854 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SUMO3P55854 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC20.22■□□□□ 0.83
SUMO3P55854 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SUMO3P55854 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SUMO3P55854 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SUMO3P55854 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SUMO3P55854 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC20.21■□□□□ 0.83
SUMO3P55854 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC20.21■□□□□ 0.83
SUMO3P55854 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
SUMO3P55854 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SUMO3P55854 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC20.21■□□□□ 0.83
SUMO3P55854 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SUMO3P55854 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SUMO3P55854 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SUMO3P55854 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SUMO3P55854 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
SUMO3P55854 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC20.2■□□□□ 0.82
SUMO3P55854 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SUMO3P55854 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SUMO3P55854 AL138724.1-201ENST00000606771 1088 ntBASIC20.2■□□□□ 0.82
SUMO3P55854 GTSE1-AS1-202ENST00000623117 1518 ntBASIC20.2■□□□□ 0.82
SUMO3P55854 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
SUMO3P55854 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SUMO3P55854 AC008406.3-201ENST00000620001 1374 ntBASIC20.2■□□□□ 0.82
SUMO3P55854 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SUMO3P55854 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
SUMO3P55854 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SUMO3P55854 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC20.19■□□□□ 0.82
SUMO3P55854 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SUMO3P55854 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
SUMO3P55854 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SUMO3P55854 AC006455.2-201ENST00000429931 906 ntBASIC20.19■□□□□ 0.82
SUMO3P55854 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC20.19■□□□□ 0.82
SUMO3P55854 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC20.19■□□□□ 0.82
SUMO3P55854 SF1-220ENST00000626028 704 ntTSL 2 BASIC20.19■□□□□ 0.82
SUMO3P55854 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC20.19■□□□□ 0.82
SUMO3P55854 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SUMO3P55854 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC20.19■□□□□ 0.82
SUMO3P55854 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC20.18■□□□□ 0.82
SUMO3P55854 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC20.18■□□□□ 0.82
SUMO3P55854 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC20.18■□□□□ 0.82
SUMO3P55854 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SUMO3P55854 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SUMO3P55854 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
SUMO3P55854 CASK-201ENST00000378154 2494 ntTSL 5 BASIC20.18■□□□□ 0.82
SUMO3P55854 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SUMO3P55854 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
SUMO3P55854 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
SUMO3P55854 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
SUMO3P55854 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SUMO3P55854 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SUMO3P55854 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
SUMO3P55854 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC20.17■□□□□ 0.82
SUMO3P55854 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SUMO3P55854 GCA-201ENST00000233612 1694 ntTSL 2 BASIC20.17■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms