Protein–RNA interactions for Protein: P52298

NCBP2, Nuclear cap-binding protein subunit 2, humanhuman

Known RBP eCLIP

Length 156 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP2P52298 MKNK2-209ENST00000589509 352 ntTSL 511.58□□□□□ -0.563e-6■■■■□ 23
NCBP2P52298 ZC3H3-201ENST00000262577 3280 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.663e-7■■■■□ 23
NCBP2P52298 TMEM8A-203ENST00000427313 587 ntTSL 410.88□□□□□ -0.672e-12■■■■□ 23
NCBP2P52298 EIF4ENIF1-201ENST00000330125 3544 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.22e-12■■■■□ 23
NCBP2P52298 EIF4ENIF1-204ENST00000397520 374 ntTSL 1 (best)7.16□□□□□ -1.262e-12■■■■□ 23
NCBP2P52298 ZNF217-202ENST00000371471 5796 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.874e-17■■■■□ 22.9
NCBP2P52298 ZNF217-203ENST00000431687 779 ntTSL 56.45□□□□□ -1.384e-17■■■■□ 22.9
NCBP2P52298 ZNF217-205ENST00000540425 568 ntTSL 36.23□□□□□ -1.414e-17■■■■□ 22.9
NCBP2P52298 EIF5-211ENST00000559532 678 ntTSL 422.27■■□□□ 1.165e-9■■■■□ 22.9
NCBP2P52298 EIF5-209ENST00000559130 583 ntTSL 319.93■□□□□ 0.785e-9■■■■□ 22.9
NCBP2P52298 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.425e-9■■■■□ 22.9
NCBP2P52298 EIF5-215ENST00000560763 723 ntTSL 217.37■□□□□ 0.375e-9■■■■□ 22.9
NCBP2P52298 EIF5-214ENST00000560338 580 ntTSL 315.21■□□□□ 0.035e-9■■■■□ 22.9
NCBP2P52298 EIF5-210ENST00000559249 704 ntTSL 215.05■□□□□ -05e-9■■■■□ 22.9
NCBP2P52298 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.265e-9■■■■□ 22.9
NCBP2P52298 EIF5-203ENST00000558265 872 ntTSL 512.56□□□□□ -0.45e-9■■■■□ 22.9
NCBP2P52298 EIF5-216ENST00000560877 521 ntTSL 412.54□□□□□ -0.45e-9■■■■□ 22.9
NCBP2P52298 EIF5-205ENST00000558506 4384 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.445e-9■■■■□ 22.9
NCBP2P52298 EIF5-204ENST00000558316 719 ntTSL 311.44□□□□□ -0.585e-9■■■■□ 22.9
NCBP2P52298 EIF5-206ENST00000558551 744 ntTSL 25.16□□□□□ -1.585e-9■■■■□ 22.9
NCBP2P52298 EIF5-213ENST00000560200 776 ntTSL 53.54□□□□□ -1.845e-9■■■■□ 22.9
NCBP2P52298 EIF5-218ENST00000561325 569 ntTSL 42.45□□□□□ -2.025e-9■■■■□ 22.9
NCBP2P52298 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.24e-7■■■■□ 22.9
NCBP2P52298 STAM2-202ENST00000463854 1364 ntTSL 1 (best)15.59■□□□□ 0.092e-6■■■■□ 22.9
NCBP2P52298 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.074e-7■■■■□ 22.9
NCBP2P52298 STAM2-206ENST00000494589 556 ntTSL 313.97□□□□□ -0.172e-6■■■■□ 22.9
NCBP2P52298 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.232e-6■■■■□ 22.9
NCBP2P52298 STAM2-204ENST00000482997 1488 ntTSL 1 (best)12.29□□□□□ -0.442e-6■■■■□ 22.9
NCBP2P52298 AC004980.1-202ENST00000450661 962 ntTSL 1 (best)21.66■■□□□ 1.063e-13■■■■□ 22.9
NCBP2P52298 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC20.61■□□□□ 0.893e-13■■■■□ 22.9
NCBP2P52298 AC004980.1-203ENST00000423084 748 ntTSL 320.57■□□□□ 0.883e-13■■■■□ 22.9
NCBP2P52298 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.031e-10■■■■□ 22.9
NCBP2P52298 BSG-211ENST00000576984 544 ntTSL 417.86■□□□□ 0.452e-6■■■■□ 22.9
NCBP2P52298 SLC16A3-209ENST00000580098 859 ntTSL 218.07■□□□□ 0.487e-14■■■■□ 22.9
NCBP2P52298 AFG3L1P-207ENST00000423742 1012 ntTSL 320.86■□□□□ 0.936e-26■■■■□ 22.9
NCBP2P52298 AFG3L1P-217ENST00000557444 2447 ntBASIC18.89■□□□□ 0.616e-26■■■■□ 22.9
NCBP2P52298 AFG3L1P-211ENST00000436447 3003 ntTSL 517.6■□□□□ 0.416e-26■■■■□ 22.9
NCBP2P52298 AFG3L1P-215ENST00000457926 2919 ntTSL 217.59■□□□□ 0.416e-26■■■■□ 22.9
NCBP2P52298 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC17.12■□□□□ 0.336e-26■■■■□ 22.9
NCBP2P52298 AFG3L1P-204ENST00000421164 1706 ntTSL 1 (best)16.31■□□□□ 0.26e-26■■■■□ 22.9
NCBP2P52298 AFG3L1P-213ENST00000450026 494 ntTSL 416.08■□□□□ 0.166e-26■■■■□ 22.9
NCBP2P52298 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC15.5■□□□□ 0.076e-26■■■■□ 22.9
NCBP2P52298 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC15.15■□□□□ 0.026e-26■■■■□ 22.9
NCBP2P52298 AFG3L1P-212ENST00000437774 3134 ntTSL 212.79□□□□□ -0.366e-26■■■■□ 22.9
NCBP2P52298 ITCH-204ENST00000479215 205 ntTSL 37.86□□□□□ -1.151e-8■■■■□ 22.9
NCBP2P52298 ITCH-206ENST00000486883 703 ntTSL 24.58□□□□□ -1.681e-8■■■■□ 22.9
NCBP2P52298 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC4.21□□□□□ -1.741e-8■■■■□ 22.9
NCBP2P52298 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.751e-8■■■■□ 22.9
NCBP2P52298 DAZAP1-209ENST00000590419 508 ntTSL 313.27□□□□□ -0.295e-7■■■■□ 22.9
NCBP2P52298 SNHG5-209ENST00000435947 696 ntTSL 212.68□□□□□ -0.382e-11■■■■□ 22.8
NCBP2P52298 BSG-209ENST00000574970 570 ntTSL 419.48■□□□□ 0.712e-6■■■■□ 22.8
NCBP2P52298 BSG-208ENST00000573784 559 ntTSL 417.44■□□□□ 0.382e-6■■■■□ 22.8
NCBP2P52298 ZNF552-203ENST00000596248 1703 ntTSL 214.61□□□□□ -0.073e-6■■■■□ 22.8
NCBP2P52298 ZNF552-204ENST00000600397 565 ntTSL 213.99□□□□□ -0.173e-6■■■■□ 22.8
NCBP2P52298 ZNF552-201ENST00000391701 2352 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.613e-6■■■■□ 22.8
NCBP2P52298 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC5.16□□□□□ -1.585e-25■■■■□ 22.7
NCBP2P52298 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.441e-6■■■■□ 22.7
NCBP2P52298 AP5Z1-207ENST00000496303 5660 ntTSL 216.22■□□□□ 0.196e-12■■■■□ 22.7
NCBP2P52298 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.286e-12■■■■□ 22.7
NCBP2P52298 AP5Z1-204ENST00000477680 3081 ntTSL 213.08□□□□□ -0.326e-12■■■■□ 22.7
NCBP2P52298 NFKBIZ-204ENST00000461724 1338 ntTSL 521.45■■□□□ 1.022e-6■■■■□ 22.7
NCBP2P52298 NFKBIZ-208ENST00000486444 613 ntTSL 318.7■□□□□ 0.582e-6■■■■□ 22.7
NCBP2P52298 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC17.81■□□□□ 0.442e-6■■■■□ 22.7
NCBP2P52298 NFKBIZ-202ENST00000326172 3923 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.332e-6■■■■□ 22.7
NCBP2P52298 NFKBIZ-207ENST00000483180 2006 ntTSL 58.64□□□□□ -1.032e-6■■■■□ 22.7
NCBP2P52298 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.692e-6■■■■□ 22.7
NCBP2P52298 SORBS2-247ENST00000470685 1790 ntTSL 514.22□□□□□ -0.136e-7■■■■□ 22.7
NCBP2P52298 SORBS2-205ENST00000393523 842 ntTSL 411.03□□□□□ -0.646e-7■■■■□ 22.7
NCBP2P52298 SORBS2-237ENST00000456060 543 ntTSL 410.27□□□□□ -0.776e-7■■■■□ 22.7
NCBP2P52298 SORBS2-231ENST00000449407 3049 ntTSL 1 (best) BASIC9.64□□□□□ -0.876e-7■■■■□ 22.7
NCBP2P52298 SORBS2-201ENST00000284776 5996 ntTSL 1 (best) BASIC9.59□□□□□ -0.876e-7■■■■□ 22.7
NCBP2P52298 SORBS2-204ENST00000355634 4622 ntAPPRIS P1 TSL 2 BASIC8.98□□□□□ -0.976e-7■■■■□ 22.7
NCBP2P52298 SORBS2-206ENST00000393528 3043 ntTSL 1 (best) BASIC8.77□□□□□ -1.016e-7■■■■□ 22.7
NCBP2P52298 SORBS2-208ENST00000415274 626 ntTSL 47.93□□□□□ -1.146e-7■■■■□ 22.7
NCBP2P52298 SORBS2-226ENST00000444781 611 ntTSL 57.93□□□□□ -1.146e-7■■■■□ 22.7
NCBP2P52298 SORBS2-241ENST00000462661 4964 ntTSL 27.36□□□□□ -1.236e-7■■■■□ 22.7
NCBP2P52298 SORBS2-218ENST00000431902 562 ntTSL 57.19□□□□□ -1.266e-7■■■■□ 22.7
NCBP2P52298 SORBS2-246ENST00000469627 1575 ntTSL 1 (best)6.68□□□□□ -1.346e-7■■■■□ 22.7
NCBP2P52298 SORBS2-249ENST00000476878 595 ntTSL 36.34□□□□□ -1.396e-7■■■■□ 22.7
NCBP2P52298 SORBS2-256ENST00000488562 598 ntTSL 45.27□□□□□ -1.576e-7■■■■□ 22.7
NCBP2P52298 SORBS2-219ENST00000432655 582 ntTSL 32.74□□□□□ -1.976e-7■■■■□ 22.7
NCBP2P52298 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.658e-8■■■■□ 22.7
NCBP2P52298 TTYH3-204ENST00000407643 4537 ntTSL 5 BASIC12.78□□□□□ -0.368e-8■■■■□ 22.7
NCBP2P52298 CCDC183-205ENST00000481601 1556 ntTSL 215.02□□□□□ -0.016e-7■■■■□ 22.6
NCBP2P52298 CCDC183-203ENST00000430612 2321 ntTSL 213.45□□□□□ -0.266e-7■■■■□ 22.6
NCBP2P52298 FMR1-216ENST00000616614 1409 ntTSL 529.52■■■□□ 2.322e-6■■■■□ 22.6
NCBP2P52298 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC26.32■■□□□ 1.82e-6■■■■□ 22.6
NCBP2P52298 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC25.29■■□□□ 1.642e-6■■■■□ 22.6
NCBP2P52298 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.382e-6■■■■□ 22.6
NCBP2P52298 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC23.53■■□□□ 1.362e-6■■■■□ 22.6
NCBP2P52298 LRRC45-206ENST00000583383 840 ntTSL 322.43■■□□□ 1.182e-6■■■■□ 22.6
NCBP2P52298 UCK1-205ENST00000459858 795 ntTSL 522.41■■□□□ 1.182e-6■■■■□ 22.6
NCBP2P52298 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC20.88■□□□□ 0.932e-6■■■■□ 22.6
NCBP2P52298 EFCAB2-214ENST00000518607 473 ntTSL 420.22■□□□□ 0.832e-6■■■■□ 22.6
NCBP2P52298 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.812e-6■■■■□ 22.6
NCBP2P52298 MIEF2-208ENST00000579341 563 ntTSL 420.06■□□□□ 0.82e-6■■■■□ 22.6
NCBP2P52298 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC19.84■□□□□ 0.772e-6■■■■□ 22.6
NCBP2P52298 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC19.8■□□□□ 0.762e-6■■■■□ 22.6
NCBP2P52298 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.642e-6■■■■□ 22.6
NCBP2P52298 MTFMT-206ENST00000560717 1111 ntTSL 518.48■□□□□ 0.552e-6■■■■□ 22.6
Retrieved 100 of 18,329 protein–RNA pairs in 240.5 ms