Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 NME4-211ENST00000620944 1193 ntTSL 2 BASIC19.61■□□□□ 0.73
HCFC1P51610 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
HCFC1P51610 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HCFC1P51610 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HCFC1P51610 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
HCFC1P51610 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
HCFC1P51610 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
HCFC1P51610 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC19.6■□□□□ 0.73
HCFC1P51610 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC19.6■□□□□ 0.73
HCFC1P51610 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
HCFC1P51610 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC19.6■□□□□ 0.73
HCFC1P51610 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HCFC1P51610 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
HCFC1P51610 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HCFC1P51610 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC19.59■□□□□ 0.73
HCFC1P51610 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
HCFC1P51610 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HCFC1P51610 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HCFC1P51610 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
HCFC1P51610 HLA-L-211ENST00000482052 1765 ntBASIC19.59■□□□□ 0.73
HCFC1P51610 DLX3-202ENST00000512495 834 ntTSL 2 BASIC19.59■□□□□ 0.73
HCFC1P51610 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC19.58■□□□□ 0.73
HCFC1P51610 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
HCFC1P51610 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
HCFC1P51610 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
HCFC1P51610 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC19.58■□□□□ 0.73
HCFC1P51610 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
HCFC1P51610 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
HCFC1P51610 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC19.58■□□□□ 0.73
HCFC1P51610 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
HCFC1P51610 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
HCFC1P51610 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.72
HCFC1P51610 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
HCFC1P51610 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
HCFC1P51610 AC016769.1-201ENST00000409132 1010 ntBASIC19.58■□□□□ 0.72
HCFC1P51610 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
HCFC1P51610 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
HCFC1P51610 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
HCFC1P51610 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
HCFC1P51610 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC19.57■□□□□ 0.72
HCFC1P51610 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HCFC1P51610 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
HCFC1P51610 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC19.57■□□□□ 0.72
HCFC1P51610 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC19.57■□□□□ 0.72
HCFC1P51610 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
HCFC1P51610 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
HCFC1P51610 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
HCFC1P51610 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC19.56■□□□□ 0.72
HCFC1P51610 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC19.56■□□□□ 0.72
HCFC1P51610 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
HCFC1P51610 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
HCFC1P51610 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
HCFC1P51610 AL499627.2-201ENST00000606283 725 ntBASIC19.56■□□□□ 0.72
HCFC1P51610 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
HCFC1P51610 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
HCFC1P51610 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
HCFC1P51610 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
HCFC1P51610 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
HCFC1P51610 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC19.56■□□□□ 0.72
HCFC1P51610 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC19.56■□□□□ 0.72
HCFC1P51610 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC19.56■□□□□ 0.72
HCFC1P51610 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC19.56■□□□□ 0.72
HCFC1P51610 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
HCFC1P51610 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
HCFC1P51610 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
HCFC1P51610 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
HCFC1P51610 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HCFC1P51610 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC19.55■□□□□ 0.72
HCFC1P51610 GXYLT1P2-201ENST00000433312 1230 ntBASIC19.55■□□□□ 0.72
HCFC1P51610 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
HCFC1P51610 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC19.55■□□□□ 0.72
HCFC1P51610 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
HCFC1P51610 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC19.55■□□□□ 0.72
HCFC1P51610 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC19.55■□□□□ 0.72
HCFC1P51610 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC19.55■□□□□ 0.72
HCFC1P51610 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HCFC1P51610 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC19.55■□□□□ 0.72
HCFC1P51610 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC19.55■□□□□ 0.72
HCFC1P51610 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
HCFC1P51610 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC19.55■□□□□ 0.72
HCFC1P51610 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
HCFC1P51610 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
HCFC1P51610 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
HCFC1P51610 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC19.54■□□□□ 0.72
HCFC1P51610 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC19.54■□□□□ 0.72
HCFC1P51610 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC19.54■□□□□ 0.72
HCFC1P51610 OR2I1P-207ENST00000453522 948 ntBASIC19.54■□□□□ 0.72
HCFC1P51610 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
HCFC1P51610 FP325331.1-202ENST00000623531 1380 ntBASIC19.54■□□□□ 0.72
HCFC1P51610 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
HCFC1P51610 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
HCFC1P51610 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC19.53■□□□□ 0.72
HCFC1P51610 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC19.53■□□□□ 0.72
HCFC1P51610 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC19.53■□□□□ 0.72
HCFC1P51610 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
HCFC1P51610 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
HCFC1P51610 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC19.53■□□□□ 0.72
HCFC1P51610 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC19.53■□□□□ 0.72
HCFC1P51610 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
HCFC1P51610 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC19.52■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms