Protein–RNA interactions for Protein: P48412

UPF3, Nonsense-mediated mRNA decay protein 3, yeastyeast

Known RBP Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UPF3P48412 SAE3YHR079C-A 276 nt4.74□□□□□ -1.65
UPF3P48412 YML057C-AYML057C-A 390 nt4.74□□□□□ -1.65
UPF3P48412 CDC28YBR160W 897 nt4.74□□□□□ -1.65
UPF3P48412 SMF1YOL122C 1728 nt4.74□□□□□ -1.65
UPF3P48412 CLB5YPR120C 1308 nt4.73□□□□□ -1.65
UPF3P48412 VHC1YBR235W 3363 nt4.73□□□□□ -1.65
UPF3P48412 ALE1YOR175C 1860 nt4.73□□□□□ -1.65
UPF3P48412 YEL067CYEL067C 588 nt4.73□□□□□ -1.65
UPF3P48412 YGR035W-AYGR035W-A 222 nt4.73□□□□□ -1.65
UPF3P48412 OMA1YKR087C 1038 nt4.73□□□□□ -1.65
UPF3P48412 BUD28YLR062C 378 nt4.73□□□□□ -1.65
UPF3P48412 HRT3YLR097C 1035 nt4.73□□□□□ -1.65
UPF3P48412 ALR2YFL050C 2577 nt4.73□□□□□ -1.65
UPF3P48412 NAM9YNL137C 1461 nt4.73□□□□□ -1.65
UPF3P48412 GSY1YFR015C 2127 nt4.73□□□□□ -1.65
UPF3P48412 PFK1YGR240C 2964 nt4.73□□□□□ -1.65
UPF3P48412 UBP10YNL186W 2379 nt4.72□□□□□ -1.65
UPF3P48412 YMR102CYMR102C 2505 nt4.72□□□□□ -1.65
UPF3P48412 YGL036WYGL036W 2730 nt4.72□□□□□ -1.65
UPF3P48412 MIM2YLR099W-A 264 nt4.72□□□□□ -1.65
UPF3P48412 GCD7YLR291C 1146 nt4.72□□□□□ -1.65
UPF3P48412 TRM10YOL093W 882 nt4.72□□□□□ -1.65
UPF3P48412 TGS1YPL157W 948 nt4.72□□□□□ -1.65
UPF3P48412 SHE3YBR130C 1278 nt4.72□□□□□ -1.65
UPF3P48412 GIP4YAL031C 2283 nt4.72□□□□□ -1.65
UPF3P48412 HRK1YOR267C 2280 nt4.72□□□□□ -1.65
UPF3P48412 TDA7YNL176C 1911 nt4.72□□□□□ -1.65
UPF3P48412 EMP46YLR080W 1335 nt4.72□□□□□ -1.65
UPF3P48412 CLF1YLR117C 2064 nt4.71□□□□□ -1.65
UPF3P48412 THI7YLR237W 1797 nt4.71□□□□□ -1.66
UPF3P48412 IMD3YLR432W 1572 nt4.71□□□□□ -1.66
UPF3P48412 UGA2YBR006W 1494 nt4.71□□□□□ -1.66
UPF3P48412 snR63snR63 255 nt4.71□□□□□ -1.66
UPF3P48412 NUP42YDR192C 1293 nt4.71□□□□□ -1.66
UPF3P48412 YEL074WYEL074W 339 nt4.71□□□□□ -1.66
UPF3P48412 FAU1YER183C 636 nt4.71□□□□□ -1.66
UPF3P48412 YGR016WYGR016W 573 nt4.71□□□□□ -1.66
UPF3P48412 GAT4YIR013C 366 nt4.71□□□□□ -1.66
UPF3P48412 RPC17YJL011C 486 nt4.71□□□□□ -1.66
UPF3P48412 YAE1YJR067C 426 nt4.71□□□□□ -1.66
UPF3P48412 YKL023WYKL023W 834 nt4.71□□□□□ -1.66
UPF3P48412 LDB18YLL049W 540 nt4.71□□□□□ -1.66
UPF3P48412 TDA5YLR426W 981 nt4.71□□□□□ -1.66
UPF3P48412 SPS4YOR313C 1017 nt4.71□□□□□ -1.66
UPF3P48412 YSA1YBR111C 696 nt4.71□□□□□ -1.66
UPF3P48412 AXL2YIL140W 2472 nt4.71□□□□□ -1.66
UPF3P48412 PMS1YNL082W 2622 nt4.71□□□□□ -1.66
UPF3P48412 RCM1YNL022C 1473 nt4.7□□□□□ -1.66
UPF3P48412 KRE6YPR159W 2163 nt4.7□□□□□ -1.66
UPF3P48412 YFR045WYFR045W 930 nt4.7□□□□□ -1.66
UPF3P48412 RAD10YML095C 633 nt4.7□□□□□ -1.66
UPF3P48412 YMR075C-AYMR075C-A 366 nt4.7□□□□□ -1.66
UPF3P48412 YCL012CYCL012C 405 nt4.7□□□□□ -1.66
UPF3P48412 PTR3YFR029W 2037 nt4.7□□□□□ -1.66
UPF3P48412 YRB30YGL164C 1323 nt4.7□□□□□ -1.66
UPF3P48412 POL31YJR006W 1464 nt4.69□□□□□ -1.66
UPF3P48412 PDR15YDR406W 4590 nt4.69□□□□□ -1.66
UPF3P48412 PHO13YDL236W 939 nt4.69□□□□□ -1.66
UPF3P48412 MF(ALPHA)2YGL089C 363 nt4.69□□□□□ -1.66
UPF3P48412 YHR069C-AYHR069C-A 363 nt4.69□□□□□ -1.66
UPF3P48412 KTR2YKR061W 1278 nt4.69□□□□□ -1.66
UPF3P48412 HEK2YBL032W 1146 nt4.69□□□□□ -1.66
UPF3P48412 VPS21YOR089C 633 nt4.69□□□□□ -1.66
UPF3P48412 MNT2YGL257C 1677 nt4.68□□□□□ -1.66
UPF3P48412 YDL026WYDL026W 312 nt4.68□□□□□ -1.66
UPF3P48412 MSS2YDL107W 1056 nt4.68□□□□□ -1.66
UPF3P48412 NPY1YGL067W 1155 nt4.68□□□□□ -1.66
UPF3P48412 YGR153WYGR153W 654 nt4.68□□□□□ -1.66
UPF3P48412 MRPL6YHR147C 645 nt4.68□□□□□ -1.66
UPF3P48412 YLR283WYLR283W 945 nt4.68□□□□□ -1.66
UPF3P48412 YLR363W-AYLR363W-A 258 nt4.68□□□□□ -1.66
UPF3P48412 YLR412C-AYLR412C-A 207 nt4.68□□□□□ -1.66
UPF3P48412 SPO20YMR017W 1194 nt4.68□□□□□ -1.66
UPF3P48412 YBL036CYBL036C 774 nt4.68□□□□□ -1.66
UPF3P48412 PRE7YBL041W 726 nt4.68□□□□□ -1.66
UPF3P48412 YNL174WYNL174W 573 nt4.68□□□□□ -1.66
UPF3P48412 MED7YOL135C 669 nt4.68□□□□□ -1.66
UPF3P48412 CDC21YOR074C 915 nt4.68□□□□□ -1.66
UPF3P48412 SSO1YPL232W 873 nt4.68□□□□□ -1.66
UPF3P48412 NHP6AYPR052C 282 nt4.68□□□□□ -1.66
UPF3P48412 MSE1YOL033W 1611 nt4.68□□□□□ -1.66
UPF3P48412 YGR266WYGR266W 2106 nt4.67□□□□□ -1.66
UPF3P48412 PUS6YGR169C 1215 nt4.67□□□□□ -1.66
UPF3P48412 YHR212W-AYHR212W-A 204 nt4.67□□□□□ -1.66
UPF3P48412 HIS6YIL020C 786 nt4.67□□□□□ -1.66
UPF3P48412 GON7YJL184W 372 nt4.67□□□□□ -1.66
UPF3P48412 YAR061WYAR061W 204 nt4.67□□□□□ -1.66
UPF3P48412 YMR084WYMR084W 789 nt4.67□□□□□ -1.66
UPF3P48412 MDG1YNL173C 1101 nt4.67□□□□□ -1.66
UPF3P48412 SOL1YNR034W 966 nt4.67□□□□□ -1.66
UPF3P48412 MRPL37YBR268W 318 nt4.67□□□□□ -1.66
UPF3P48412 PRP19YLL036C 1512 nt4.67□□□□□ -1.66
UPF3P48412 SYF1YDR416W 2580 nt4.66□□□□□ -1.66
UPF3P48412 YMR111CYMR111C 1389 nt4.66□□□□□ -1.66
UPF3P48412 APP1YNL094W 1764 nt4.66□□□□□ -1.66
UPF3P48412 YCL068CYCL068C 783 nt4.66□□□□□ -1.66
UPF3P48412 SDT1YGL224C 843 nt4.66□□□□□ -1.66
UPF3P48412 MRPS35YGR165W 1038 nt4.66□□□□□ -1.66
UPF3P48412 GAT2YMR136W 1683 nt4.65□□□□□ -1.66
UPF3P48412 YJL028WYJL028W 336 nt4.65□□□□□ -1.67
Retrieved 100 of 7,029 protein–RNA pairs in 29.4 ms