Protein–RNA interactions for Protein: P46098

HTR3A, 5-hydroxytryptamine receptor 3A, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR3AP46098 MED17-221ENST00000639724 2317 ntTSL 5 BASIC20.52■□□□□ 0.88
HTR3AP46098 TSPY9P-201ENST00000440215 945 ntBASIC20.52■□□□□ 0.88
HTR3AP46098 TSPY11P-201ENST00000442607 1045 ntBASIC20.52■□□□□ 0.88
HTR3AP46098 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
HTR3AP46098 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
HTR3AP46098 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC20.52■□□□□ 0.87
HTR3AP46098 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.87
HTR3AP46098 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
HTR3AP46098 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
HTR3AP46098 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
HTR3AP46098 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
HTR3AP46098 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC20.51■□□□□ 0.87
HTR3AP46098 CLTA-206ENST00000466396 695 ntTSL 2 BASIC20.51■□□□□ 0.87
HTR3AP46098 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC20.51■□□□□ 0.87
HTR3AP46098 TRIR-205ENST00000592273 783 ntTSL 3 BASIC20.51■□□□□ 0.87
HTR3AP46098 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC20.51■□□□□ 0.87
HTR3AP46098 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
HTR3AP46098 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
HTR3AP46098 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
HTR3AP46098 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC20.51■□□□□ 0.87
HTR3AP46098 C1orf229-201ENST00000623686 2258 ntBASIC20.51■□□□□ 0.87
HTR3AP46098 GALC-202ENST00000393568 2054 ntTSL 2 BASIC20.5■□□□□ 0.87
HTR3AP46098 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC20.5■□□□□ 0.87
HTR3AP46098 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
HTR3AP46098 SLC25A24-204ENST00000569674 2357 ntBASIC20.5■□□□□ 0.87
HTR3AP46098 USF2-207ENST00000595068 1612 ntTSL 5 BASIC20.5■□□□□ 0.87
HTR3AP46098 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
HTR3AP46098 CREM-229ENST00000474362 1030 ntTSL 2 BASIC20.5■□□□□ 0.87
HTR3AP46098 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC20.5■□□□□ 0.87
HTR3AP46098 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
HTR3AP46098 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
HTR3AP46098 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC20.5■□□□□ 0.87
HTR3AP46098 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
HTR3AP46098 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
HTR3AP46098 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
HTR3AP46098 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
HTR3AP46098 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
HTR3AP46098 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
HTR3AP46098 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
HTR3AP46098 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
HTR3AP46098 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
HTR3AP46098 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC20.49■□□□□ 0.87
HTR3AP46098 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC20.49■□□□□ 0.87
HTR3AP46098 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC20.49■□□□□ 0.87
HTR3AP46098 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
HTR3AP46098 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
HTR3AP46098 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
HTR3AP46098 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
HTR3AP46098 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC20.48■□□□□ 0.87
HTR3AP46098 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC20.48■□□□□ 0.87
HTR3AP46098 TFPT-201ENST00000391757 774 ntTSL 5 BASIC20.48■□□□□ 0.87
HTR3AP46098 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
HTR3AP46098 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC20.48■□□□□ 0.87
HTR3AP46098 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
HTR3AP46098 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
HTR3AP46098 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC20.48■□□□□ 0.87
HTR3AP46098 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC20.48■□□□□ 0.87
HTR3AP46098 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC20.48■□□□□ 0.87
HTR3AP46098 ANOS2P-203ENST00000472227 1816 ntBASIC20.48■□□□□ 0.87
HTR3AP46098 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
HTR3AP46098 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
HTR3AP46098 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC20.47■□□□□ 0.87
HTR3AP46098 AC092068.2-201ENST00000590491 1708 ntBASIC20.47■□□□□ 0.87
HTR3AP46098 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
HTR3AP46098 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
HTR3AP46098 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
HTR3AP46098 CD72-202ENST00000378430 585 ntTSL 3 BASIC20.47■□□□□ 0.87
HTR3AP46098 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
HTR3AP46098 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
HTR3AP46098 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
HTR3AP46098 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
HTR3AP46098 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
HTR3AP46098 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
HTR3AP46098 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
HTR3AP46098 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
HTR3AP46098 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
HTR3AP46098 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
HTR3AP46098 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC20.46■□□□□ 0.87
HTR3AP46098 GUSBP5-201ENST00000418136 578 ntBASIC20.46■□□□□ 0.87
HTR3AP46098 UNC93B8-201ENST00000511903 705 ntBASIC20.46■□□□□ 0.87
HTR3AP46098 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC20.46■□□□□ 0.87
HTR3AP46098 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC20.46■□□□□ 0.87
HTR3AP46098 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
HTR3AP46098 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
HTR3AP46098 NFE2L3P1-201ENST00000588207 1959 ntBASIC20.46■□□□□ 0.87
HTR3AP46098 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC20.46■□□□□ 0.87
HTR3AP46098 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
HTR3AP46098 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
HTR3AP46098 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
HTR3AP46098 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
HTR3AP46098 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
HTR3AP46098 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC20.45■□□□□ 0.86
HTR3AP46098 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC20.45■□□□□ 0.86
HTR3AP46098 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC20.45■□□□□ 0.86
HTR3AP46098 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
HTR3AP46098 MIR6724-1-201ENST00000616420 92 ntBASIC20.45■□□□□ 0.86
HTR3AP46098 MIR6724-2-201ENST00000616483 92 ntBASIC20.45■□□□□ 0.86
HTR3AP46098 MIR6724-4-201ENST00000617390 92 ntBASIC20.45■□□□□ 0.86
HTR3AP46098 MIR6724-3-201ENST00000622482 92 ntBASIC20.45■□□□□ 0.86
HTR3AP46098 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms