Protein–RNA interactions for Protein: P41817

CUP9, Homeobox protein CUP9, yeastyeast

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CUP9P41817 STE12YHR084W 2067 nt3.66□□□□□ -1.82
CUP9P41817 MET3YJR010W 1536 nt3.66□□□□□ -1.82
CUP9P41817 LCB2YDR062W 1686 nt3.66□□□□□ -1.82
CUP9P41817 HMLALPHA1YCL066W 528 nt3.66□□□□□ -1.82
CUP9P41817 MATALPHA1YCR040W 528 nt3.66□□□□□ -1.82
CUP9P41817 BCP1YDR361C 852 nt3.66□□□□□ -1.82
CUP9P41817 YKL162C-AYKL162C-A 153 nt3.66□□□□□ -1.82
CUP9P41817 YML116W-AYML116W-A 303 nt3.66□□□□□ -1.82
CUP9P41817 YPL025CYPL025C 558 nt3.66□□□□□ -1.82
CUP9P41817 SLX1YBR228W 915 nt3.66□□□□□ -1.82
CUP9P41817 FAR10YLR238W 1437 nt3.66□□□□□ -1.82
CUP9P41817 TOG1YER184C 2385 nt3.66□□□□□ -1.82
CUP9P41817 PTR2YKR093W 1806 nt3.65□□□□□ -1.82
CUP9P41817 SSL1YLR005W 1386 nt3.65□□□□□ -1.82
CUP9P41817 YNR065CYNR065C 3351 nt3.65□□□□□ -1.82
CUP9P41817 MTR10YOR160W 2919 nt3.65□□□□□ -1.82
CUP9P41817 YJL211CYJL211C 444 nt3.65□□□□□ -1.83
CUP9P41817 YJL218WYJL218W 591 nt3.65□□□□□ -1.83
CUP9P41817 GPI12YMR281W 915 nt3.65□□□□□ -1.83
CUP9P41817 TOM7YNL070W 183 nt3.65□□□□□ -1.83
CUP9P41817 YPL162CYPL162C 822 nt3.65□□□□□ -1.83
CUP9P41817 ARO80YDR421W 2853 nt3.65□□□□□ -1.83
CUP9P41817 MDM30YLR368W 1797 nt3.65□□□□□ -1.83
CUP9P41817 PFK1YGR240C 2964 nt3.65□□□□□ -1.83
CUP9P41817 FAS2YPL231W 5664 nt3.65□□□□□ -1.83
CUP9P41817 RKM2YDR198C 1440 nt3.64□□□□□ -1.83
CUP9P41817 KIC1YHR102W 3243 nt3.64□□□□□ -1.83
CUP9P41817 PEP5YMR231W 3090 nt3.64□□□□□ -1.83
CUP9P41817 YDL094CYDL094C 510 nt3.64□□□□□ -1.83
CUP9P41817 snR7-LsnR7-L 214 nt3.64□□□□□ -1.83
CUP9P41817 REC114YMR133W 1287 nt3.64□□□□□ -1.83
CUP9P41817 RFA2YNL312W 822 nt3.64□□□□□ -1.83
CUP9P41817 EGT2YNL327W 3126 nt3.64□□□□□ -1.83
CUP9P41817 TRE1YPL176C 2352 nt3.63□□□□□ -1.83
CUP9P41817 ELO2YCR034W 1044 nt3.63□□□□□ -1.83
CUP9P41817 THI13YDL244W 1023 nt3.63□□□□□ -1.83
CUP9P41817 GCV1YDR019C 1203 nt3.63□□□□□ -1.83
CUP9P41817 SPC19YDR201W 498 nt3.63□□□□□ -1.83
CUP9P41817 MSW1YDR268W 1140 nt3.63□□□□□ -1.83
CUP9P41817 CYM1YDR430C 2970 nt3.63□□□□□ -1.83
CUP9P41817 FUR1YHR128W 651 nt3.63□□□□□ -1.83
CUP9P41817 THI11YJR156C 1023 nt3.63□□□□□ -1.83
CUP9P41817 MCM1YMR043W 861 nt3.63□□□□□ -1.83
CUP9P41817 YCL022CYCL022C 516 nt3.63□□□□□ -1.83
CUP9P41817 PBN1YCL052C 1251 nt3.63□□□□□ -1.83
CUP9P41817 UBP7YIL156W 3216 nt3.63□□□□□ -1.83
CUP9P41817 MMT1YMR177W 1533 nt3.63□□□□□ -1.83
CUP9P41817 PHO84YML123C 1764 nt3.63□□□□□ -1.83
CUP9P41817 TEL1YBL088C 8364 nt3.63□□□□□ -1.83
CUP9P41817 BUD8YLR353W 1812 nt3.63□□□□□ -1.83
CUP9P41817 SVF1YDR346C 1446 nt3.62□□□□□ -1.83
CUP9P41817 SKG6YHR149C 2205 nt3.62□□□□□ -1.83
CUP9P41817 RRN11YML043C 1524 nt3.62□□□□□ -1.83
CUP9P41817 TRM8YDL201W 861 nt3.62□□□□□ -1.83
CUP9P41817 YDR445CYDR445C 408 nt3.62□□□□□ -1.83
CUP9P41817 YER133W-AYER133W-A 342 nt3.62□□□□□ -1.83
CUP9P41817 DAM1YGR113W 1032 nt3.62□□□□□ -1.83
CUP9P41817 IGO2YHR132W-A 396 nt3.62□□□□□ -1.83
CUP9P41817 YHR173CYHR173C 339 nt3.62□□□□□ -1.83
CUP9P41817 SEC72YLR292C 582 nt3.62□□□□□ -1.83
CUP9P41817 FLD1YLR404W 858 nt3.62□□□□□ -1.83
CUP9P41817 TDA5YLR426W 981 nt3.62□□□□□ -1.83
CUP9P41817 YMR085WYMR085W 1299 nt3.62□□□□□ -1.83
CUP9P41817 HOM3YER052C 1584 nt3.62□□□□□ -1.83
CUP9P41817 EMP47YFL048C 1338 nt3.62□□□□□ -1.83
CUP9P41817 FPK1YNR047W 2682 nt3.61□□□□□ -1.83
CUP9P41817 IES6YEL044W 501 nt3.61□□□□□ -1.83
CUP9P41817 RPS0AYGR214W 759 nt3.61□□□□□ -1.83
CUP9P41817 YNL228WYNL228W 777 nt3.61□□□□□ -1.83
CUP9P41817 EFM2YBR271W 1260 nt3.61□□□□□ -1.83
CUP9P41817 BBC1YJL020C 3474 nt3.61□□□□□ -1.83
CUP9P41817 FRE7YOL152W 1863 nt3.6□□□□□ -1.83
CUP9P41817 TRF5YNL299W 1929 nt3.6□□□□□ -1.83
CUP9P41817 PRM7YDL039C 2097 nt3.6□□□□□ -1.83
CUP9P41817 USA1YML029W 2517 nt3.6□□□□□ -1.83
CUP9P41817 YIL028WYIL028W 399 nt3.6□□□□□ -1.83
CUP9P41817 MAC1YMR021C 1254 nt3.6□□□□□ -1.83
CUP9P41817 YBR225WYBR225W 2703 nt3.6□□□□□ -1.83
CUP9P41817 LTV1YKL143W 1392 nt3.6□□□□□ -1.83
CUP9P41817 RCM1YNL022C 1473 nt3.6□□□□□ -1.83
CUP9P41817 YDR230WYDR230W 348 nt3.59□□□□□ -1.83
CUP9P41817 YGL199CYGL199C 471 nt3.59□□□□□ -1.83
CUP9P41817 SOL4YGR248W 768 nt3.59□□□□□ -1.83
CUP9P41817 BAT2YJR148W 1131 nt3.59□□□□□ -1.83
CUP9P41817 CUZ1YNL155W 825 nt3.59□□□□□ -1.83
CUP9P41817 MED4YOR174W 855 nt3.59□□□□□ -1.83
CUP9P41817 YHR177WYHR177W 1362 nt3.59□□□□□ -1.83
CUP9P41817 BSC5YNR069C 1470 nt3.59□□□□□ -1.84
CUP9P41817 PMT5YDL093W 2232 nt3.59□□□□□ -1.84
CUP9P41817 SEN1YLR430W 6696 nt3.59□□□□□ -1.84
CUP9P41817 ECM32YER176W 3366 nt3.59□□□□□ -1.84
CUP9P41817 ATG2YNL242W 4779 nt3.58□□□□□ -1.84
CUP9P41817 GMH1YKR030W 822 nt3.58□□□□□ -1.84
CUP9P41817 YKR104WYKR104W 921 nt3.58□□□□□ -1.84
CUP9P41817 ASI2YNL159C 870 nt3.58□□□□□ -1.84
CUP9P41817 HEM15YOR176W 1182 nt3.58□□□□□ -1.84
CUP9P41817 ARG4YHR018C 1392 nt3.58□□□□□ -1.84
CUP9P41817 YOL075CYOL075C 3885 nt3.58□□□□□ -1.84
CUP9P41817 YPK9YOR291W 4419 nt3.58□□□□□ -1.84
CUP9P41817 DCV1YFR012W 609 nt3.57□□□□□ -1.84
Retrieved 100 of 7,029 protein–RNA pairs in 15 ms