Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
CD40P25942 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CD40P25942 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
CD40P25942 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CD40P25942 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC19.29■□□□□ 0.68
CD40P25942 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CD40P25942 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CD40P25942 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC19.29■□□□□ 0.68
CD40P25942 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC19.29■□□□□ 0.68
CD40P25942 LGR4-203ENST00000480977 492 ntTSL 2 BASIC19.29■□□□□ 0.68
CD40P25942 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC19.29■□□□□ 0.68
CD40P25942 MPST-208ENST00000628507 698 ntTSL 5 BASIC19.29■□□□□ 0.68
CD40P25942 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
CD40P25942 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CD40P25942 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC19.29■□□□□ 0.68
CD40P25942 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
CD40P25942 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
CD40P25942 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC19.28■□□□□ 0.68
CD40P25942 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
CD40P25942 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CD40P25942 RBM38-205ENST00000440234 686 ntTSL 2 BASIC19.28■□□□□ 0.68
CD40P25942 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CD40P25942 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CD40P25942 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CD40P25942 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CD40P25942 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CD40P25942 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC19.28■□□□□ 0.68
CD40P25942 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC19.27■□□□□ 0.68
CD40P25942 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CD40P25942 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CD40P25942 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC19.27■□□□□ 0.68
CD40P25942 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CD40P25942 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CD40P25942 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC19.27■□□□□ 0.68
CD40P25942 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC19.27■□□□□ 0.68
CD40P25942 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC19.27■□□□□ 0.68
CD40P25942 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CD40P25942 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
CD40P25942 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
CD40P25942 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC19.27■□□□□ 0.68
CD40P25942 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CD40P25942 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.67
CD40P25942 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
CD40P25942 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CD40P25942 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CD40P25942 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC19.26■□□□□ 0.67
CD40P25942 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CD40P25942 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CD40P25942 AC079630.1-202ENST00000618127 1840 ntBASIC19.26■□□□□ 0.67
CD40P25942 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CD40P25942 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CD40P25942 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CD40P25942 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CD40P25942 GRAMD4P2-201ENST00000423297 1097 ntBASIC19.26■□□□□ 0.67
CD40P25942 SLC47A1P1-202ENST00000449666 945 ntBASIC19.26■□□□□ 0.67
CD40P25942 AC126544.1-201ENST00000580842 1059 ntBASIC19.26■□□□□ 0.67
CD40P25942 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CD40P25942 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC19.26■□□□□ 0.67
CD40P25942 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
CD40P25942 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CD40P25942 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CD40P25942 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
CD40P25942 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC19.25■□□□□ 0.67
CD40P25942 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CD40P25942 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CD40P25942 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
CD40P25942 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CD40P25942 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CD40P25942 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CD40P25942 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CD40P25942 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC19.24■□□□□ 0.67
CD40P25942 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
CD40P25942 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC19.24■□□□□ 0.67
CD40P25942 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CD40P25942 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC19.24■□□□□ 0.67
CD40P25942 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
CD40P25942 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CD40P25942 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CD40P25942 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CD40P25942 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CD40P25942 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
CD40P25942 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC19.23■□□□□ 0.67
CD40P25942 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CD40P25942 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CD40P25942 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC19.23■□□□□ 0.67
CD40P25942 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
CD40P25942 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC19.23■□□□□ 0.67
CD40P25942 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CD40P25942 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CD40P25942 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC19.23■□□□□ 0.67
CD40P25942 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CD40P25942 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
CD40P25942 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CD40P25942 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CD40P25942 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CD40P25942 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
CD40P25942 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CD40P25942 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CD40P25942 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
CD40P25942 OR2I1P-207ENST00000453522 948 ntBASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms