Protein–RNA interactions for Protein: P18545

PDE6G, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit gamma, humanhuman

Predictions only

Length 87 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6GP18545 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
PDE6GP18545 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
PDE6GP18545 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
PDE6GP18545 CAHM-201ENST00000604200 896 ntBASIC13.84□□□□□ -0.19
PDE6GP18545 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
PDE6GP18545 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
PDE6GP18545 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
PDE6GP18545 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
PDE6GP18545 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
PDE6GP18545 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC13.84□□□□□ -0.19
PDE6GP18545 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
PDE6GP18545 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
PDE6GP18545 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC13.83□□□□□ -0.19
PDE6GP18545 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
PDE6GP18545 FBXW4P1-201ENST00000426721 2239 ntBASIC13.83□□□□□ -0.2
PDE6GP18545 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC13.83□□□□□ -0.2
PDE6GP18545 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
PDE6GP18545 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
PDE6GP18545 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC13.83□□□□□ -0.2
PDE6GP18545 AC005559.1-201ENST00000589661 871 ntBASIC13.83□□□□□ -0.2
PDE6GP18545 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
PDE6GP18545 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
PDE6GP18545 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
PDE6GP18545 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
PDE6GP18545 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
PDE6GP18545 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PDE6GP18545 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
PDE6GP18545 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
PDE6GP18545 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC13.82□□□□□ -0.2
PDE6GP18545 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PDE6GP18545 AC073130.3-201ENST00000624389 2278 ntBASIC13.82□□□□□ -0.2
PDE6GP18545 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
PDE6GP18545 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC13.82□□□□□ -0.2
PDE6GP18545 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PDE6GP18545 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PDE6GP18545 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
PDE6GP18545 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC13.82□□□□□ -0.2
PDE6GP18545 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC13.82□□□□□ -0.2
PDE6GP18545 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
PDE6GP18545 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
PDE6GP18545 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
PDE6GP18545 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC13.81□□□□□ -0.2
PDE6GP18545 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
PDE6GP18545 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
PDE6GP18545 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
PDE6GP18545 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
PDE6GP18545 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
PDE6GP18545 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
PDE6GP18545 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
PDE6GP18545 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
PDE6GP18545 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
PDE6GP18545 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
PDE6GP18545 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
PDE6GP18545 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
PDE6GP18545 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
PDE6GP18545 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
PDE6GP18545 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
PDE6GP18545 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
PDE6GP18545 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
PDE6GP18545 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
PDE6GP18545 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
PDE6GP18545 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
PDE6GP18545 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
PDE6GP18545 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
PDE6GP18545 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
PDE6GP18545 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
PDE6GP18545 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
PDE6GP18545 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
PDE6GP18545 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
PDE6GP18545 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
PDE6GP18545 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
PDE6GP18545 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
PDE6GP18545 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
PDE6GP18545 AL359258.2-201ENST00000564063 1566 ntBASIC13.79□□□□□ -0.2
PDE6GP18545 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
PDE6GP18545 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC13.79□□□□□ -0.2
PDE6GP18545 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PDE6GP18545 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
PDE6GP18545 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
PDE6GP18545 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PDE6GP18545 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
PDE6GP18545 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
PDE6GP18545 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PDE6GP18545 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
PDE6GP18545 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
PDE6GP18545 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
PDE6GP18545 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PDE6GP18545 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
PDE6GP18545 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
PDE6GP18545 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
PDE6GP18545 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PDE6GP18545 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC13.78□□□□□ -0.2
PDE6GP18545 COMT-203ENST00000403184 2217 ntTSL 2 BASIC13.78□□□□□ -0.2
PDE6GP18545 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
PDE6GP18545 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC13.78□□□□□ -0.2
PDE6GP18545 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
PDE6GP18545 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC13.78□□□□□ -0.2
PDE6GP18545 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
PDE6GP18545 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PDE6GP18545 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC13.78□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms