Protein–RNA interactions for Protein: P18077

RPL35A, 60S ribosomal protein L35a, humanhuman

Known RBP Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL35AP18077 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RPL35AP18077 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
RPL35AP18077 AC135279.3-201ENST00000610945 1311 ntBASIC16.53■□□□□ 0.24
RPL35AP18077 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RPL35AP18077 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RPL35AP18077 ASB1-202ENST00000409297 878 ntTSL 5 BASIC16.53■□□□□ 0.24
RPL35AP18077 PTCHD3P2-201ENST00000424937 1205 ntBASIC16.53■□□□□ 0.24
RPL35AP18077 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC16.53■□□□□ 0.24
RPL35AP18077 AC024257.2-201ENST00000549699 147 ntBASIC16.53■□□□□ 0.24
RPL35AP18077 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
RPL35AP18077 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
RPL35AP18077 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC16.53■□□□□ 0.24
RPL35AP18077 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RPL35AP18077 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RPL35AP18077 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
RPL35AP18077 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC16.52■□□□□ 0.24
RPL35AP18077 VGF-203ENST00000611537 1622 ntTSL 5 BASIC16.52■□□□□ 0.24
RPL35AP18077 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RPL35AP18077 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RPL35AP18077 SERBP1P1-201ENST00000396021 1160 ntBASIC16.52■□□□□ 0.24
RPL35AP18077 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
RPL35AP18077 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC16.52■□□□□ 0.24
RPL35AP18077 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
RPL35AP18077 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
RPL35AP18077 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
RPL35AP18077 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC16.52■□□□□ 0.23
RPL35AP18077 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
RPL35AP18077 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RPL35AP18077 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
RPL35AP18077 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC16.51■□□□□ 0.23
RPL35AP18077 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RPL35AP18077 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
RPL35AP18077 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RPL35AP18077 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RPL35AP18077 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RPL35AP18077 MIR638-201ENST00000385237 100 ntBASIC16.51■□□□□ 0.23
RPL35AP18077 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC16.51■□□□□ 0.23
RPL35AP18077 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC16.51■□□□□ 0.23
RPL35AP18077 pRNA.6-201ENST00000610482 90 ntBASIC16.51■□□□□ 0.23
RPL35AP18077 pRNA.5-201ENST00000612139 90 ntBASIC16.51■□□□□ 0.23
RPL35AP18077 pRNA.11-201ENST00000618423 90 ntBASIC16.51■□□□□ 0.23
RPL35AP18077 pRNA.13-201ENST00000619112 90 ntBASIC16.51■□□□□ 0.23
RPL35AP18077 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC16.51■□□□□ 0.23
RPL35AP18077 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
RPL35AP18077 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RPL35AP18077 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RPL35AP18077 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RPL35AP18077 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RPL35AP18077 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RPL35AP18077 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RPL35AP18077 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
RPL35AP18077 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RPL35AP18077 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC16.5■□□□□ 0.23
RPL35AP18077 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RPL35AP18077 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC16.5■□□□□ 0.23
RPL35AP18077 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC16.5■□□□□ 0.23
RPL35AP18077 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RPL35AP18077 AC106739.1-201ENST00000617035 715 ntBASIC16.5■□□□□ 0.23
RPL35AP18077 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RPL35AP18077 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC16.5■□□□□ 0.23
RPL35AP18077 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
RPL35AP18077 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RPL35AP18077 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC16.5■□□□□ 0.23
RPL35AP18077 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RPL35AP18077 AC019069.1-201ENST00000610008 1333 ntBASIC16.49■□□□□ 0.23
RPL35AP18077 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
RPL35AP18077 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RPL35AP18077 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC16.49■□□□□ 0.23
RPL35AP18077 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
RPL35AP18077 PTMA-205ENST00000410064 814 ntTSL 2 BASIC16.49■□□□□ 0.23
RPL35AP18077 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RPL35AP18077 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC16.49■□□□□ 0.23
RPL35AP18077 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
RPL35AP18077 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
RPL35AP18077 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RPL35AP18077 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RPL35AP18077 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
RPL35AP18077 AC093323.1-202ENST00000635031 2045 ntBASIC16.48■□□□□ 0.23
RPL35AP18077 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RPL35AP18077 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
RPL35AP18077 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RPL35AP18077 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC16.48■□□□□ 0.23
RPL35AP18077 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RPL35AP18077 MIR3181-201ENST00000578512 73 ntBASIC16.48■□□□□ 0.23
RPL35AP18077 AC005837.3-201ENST00000612163 286 ntBASIC16.48■□□□□ 0.23
RPL35AP18077 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC16.48■□□□□ 0.23
RPL35AP18077 SF1-220ENST00000626028 704 ntTSL 2 BASIC16.48■□□□□ 0.23
RPL35AP18077 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
RPL35AP18077 AC144652.1-201ENST00000609974 1624 ntBASIC16.48■□□□□ 0.23
RPL35AP18077 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
RPL35AP18077 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
RPL35AP18077 AC079630.1-202ENST00000618127 1840 ntBASIC16.47■□□□□ 0.23
RPL35AP18077 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RPL35AP18077 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC16.47■□□□□ 0.23
RPL35AP18077 MIR4767-201ENST00000582827 78 ntBASIC16.47■□□□□ 0.23
RPL35AP18077 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC16.47■□□□□ 0.23
RPL35AP18077 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC16.47■□□□□ 0.23
RPL35AP18077 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
RPL35AP18077 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RPL35AP18077 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms