Protein–RNA interactions for Protein: P12694

BCKDHA, 2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCKDHAP12694 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC21.32■■□□□ 1
BCKDHAP12694 CLTA-210ENST00000540080 989 ntTSL 2 BASIC21.32■■□□□ 1
BCKDHAP12694 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC21.32■■□□□ 1
BCKDHAP12694 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
BCKDHAP12694 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
BCKDHAP12694 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
BCKDHAP12694 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
BCKDHAP12694 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
BCKDHAP12694 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC21.32■■□□□ 1
BCKDHAP12694 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
BCKDHAP12694 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC21.32■■□□□ 1
BCKDHAP12694 AC021242.3-201ENST00000607598 1377 ntBASIC21.32■■□□□ 1
BCKDHAP12694 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
BCKDHAP12694 LSR-203ENST00000360798 1963 ntTSL 2 BASIC21.32■■□□□ 1
BCKDHAP12694 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
BCKDHAP12694 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
BCKDHAP12694 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
BCKDHAP12694 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
BCKDHAP12694 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC21.31■■□□□ 1
BCKDHAP12694 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC21.31■■□□□ 1
BCKDHAP12694 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
BCKDHAP12694 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
BCKDHAP12694 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
BCKDHAP12694 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC21.31■■□□□ 1
BCKDHAP12694 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC21.31■■□□□ 1
BCKDHAP12694 MIR6722-201ENST00000617286 78 ntBASIC21.31■■□□□ 1
BCKDHAP12694 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
BCKDHAP12694 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
BCKDHAP12694 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
BCKDHAP12694 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
BCKDHAP12694 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC21.31■■□□□ 1
BCKDHAP12694 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
BCKDHAP12694 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
BCKDHAP12694 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC21.3■■□□□ 1
BCKDHAP12694 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC21.3■■□□□ 1
BCKDHAP12694 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
BCKDHAP12694 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
BCKDHAP12694 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
BCKDHAP12694 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
BCKDHAP12694 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC21.3■■□□□ 1
BCKDHAP12694 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
BCKDHAP12694 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC21.3■■□□□ 1
BCKDHAP12694 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
BCKDHAP12694 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC21.3■■□□□ 1
BCKDHAP12694 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC21.3■■□□□ 1
BCKDHAP12694 AC005703.6-201ENST00000623265 1329 ntBASIC21.29■■□□□ 1
BCKDHAP12694 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
BCKDHAP12694 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC21.29■■□□□ 1
BCKDHAP12694 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
BCKDHAP12694 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
BCKDHAP12694 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC21.29■■□□□ 1
BCKDHAP12694 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
BCKDHAP12694 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
BCKDHAP12694 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC21.29■■□□□ 1
BCKDHAP12694 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC21.29■■□□□ 1
BCKDHAP12694 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC21.29■■□□□ 1
BCKDHAP12694 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC21.29■■□□□ 1
BCKDHAP12694 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC21.29■■□□□ 1
BCKDHAP12694 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
BCKDHAP12694 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC21.28■■□□□ 1
BCKDHAP12694 LINC00565-201ENST00000562710 2331 ntBASIC21.28■■□□□ 1
BCKDHAP12694 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
BCKDHAP12694 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC21.28■■□□□ 1
BCKDHAP12694 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC21.28■■□□□ 1
BCKDHAP12694 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC21.28■■□□□ 1
BCKDHAP12694 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
BCKDHAP12694 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC21.28■■□□□ 1
BCKDHAP12694 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC21.28■■□□□ 1
BCKDHAP12694 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC21.28■■□□□ 1
BCKDHAP12694 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC21.27■■□□□ 1
BCKDHAP12694 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC21.27■■□□□ 1
BCKDHAP12694 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC21.27■■□□□ 1
BCKDHAP12694 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
BCKDHAP12694 BX664725.1-201ENST00000438252 379 ntBASIC21.27■■□□□ 1
BCKDHAP12694 PRTG-204ENST00000561292 833 ntTSL 3 BASIC21.27■■□□□ 1
BCKDHAP12694 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC21.27■■□□□ 1
BCKDHAP12694 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
BCKDHAP12694 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
BCKDHAP12694 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC21.27■□□□□ 0.99
BCKDHAP12694 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
BCKDHAP12694 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
BCKDHAP12694 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
BCKDHAP12694 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
BCKDHAP12694 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
BCKDHAP12694 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC21.26■□□□□ 0.99
BCKDHAP12694 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
BCKDHAP12694 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
BCKDHAP12694 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
BCKDHAP12694 AC242852.2-201ENST00000615738 1807 ntBASIC21.26■□□□□ 0.99
BCKDHAP12694 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
BCKDHAP12694 AC127496.7-201ENST00000625110 1798 ntBASIC21.25■□□□□ 0.99
BCKDHAP12694 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
BCKDHAP12694 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
BCKDHAP12694 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
BCKDHAP12694 CLTA-206ENST00000466396 695 ntTSL 2 BASIC21.25■□□□□ 0.99
BCKDHAP12694 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC21.25■□□□□ 0.99
BCKDHAP12694 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
BCKDHAP12694 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC21.25■□□□□ 0.99
BCKDHAP12694 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
BCKDHAP12694 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms