Protein–RNA interactions for Protein: P11047

LAMC1, Laminin subunit gamma-1, humanhuman

Predictions only

Length 1,609 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMC1P11047 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC31.93■■■□□ 2.7
LAMC1P11047 AL137784.2-201ENST00000607332 1000 ntBASIC31.93■■■□□ 2.7
LAMC1P11047 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC31.93■■■□□ 2.7
LAMC1P11047 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC31.93■■■□□ 2.7
LAMC1P11047 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC31.93■■■□□ 2.7
LAMC1P11047 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC31.93■■■□□ 2.7
LAMC1P11047 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC31.93■■■□□ 2.7
LAMC1P11047 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC31.93■■■□□ 2.7
LAMC1P11047 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC31.93■■■□□ 2.7
LAMC1P11047 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
LAMC1P11047 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC31.93■■■□□ 2.7
LAMC1P11047 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
LAMC1P11047 TSPY26P-201ENST00000476365 1326 ntBASIC31.92■■■□□ 2.7
LAMC1P11047 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
LAMC1P11047 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC31.92■■■□□ 2.7
LAMC1P11047 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC31.92■■■□□ 2.7
LAMC1P11047 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
LAMC1P11047 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC31.92■■■□□ 2.7
LAMC1P11047 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC31.91■■■□□ 2.7
LAMC1P11047 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
LAMC1P11047 AC126544.1-201ENST00000580842 1059 ntBASIC31.91■■■□□ 2.7
LAMC1P11047 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC31.9■■■□□ 2.7
LAMC1P11047 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC31.9■■■□□ 2.7
LAMC1P11047 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC31.9■■■□□ 2.7
LAMC1P11047 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC31.9■■■□□ 2.7
LAMC1P11047 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC31.9■■■□□ 2.7
LAMC1P11047 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC31.9■■■□□ 2.7
LAMC1P11047 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC31.9■■■□□ 2.7
LAMC1P11047 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC31.9■■■□□ 2.7
LAMC1P11047 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC31.89■■■□□ 2.7
LAMC1P11047 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC31.89■■■□□ 2.7
LAMC1P11047 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC31.89■■■□□ 2.7
LAMC1P11047 DUX4L2-201ENST00000561772 1275 ntBASIC31.89■■■□□ 2.7
LAMC1P11047 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC31.89■■■□□ 2.7
LAMC1P11047 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC31.89■■■□□ 2.7
LAMC1P11047 DUX4L6-201ENST00000626483 1275 ntBASIC31.89■■■□□ 2.7
LAMC1P11047 DUX4L1-201ENST00000627662 1275 ntBASIC31.89■■■□□ 2.7
LAMC1P11047 DUX4L8-201ENST00000629013 1275 ntBASIC31.89■■■□□ 2.7
LAMC1P11047 DUX4L3-201ENST00000630187 1275 ntBASIC31.89■■■□□ 2.7
LAMC1P11047 DUX4L7-201ENST00000630678 1275 ntBASIC31.89■■■□□ 2.7
LAMC1P11047 DUX4L5-201ENST00000630834 1275 ntBASIC31.89■■■□□ 2.7
LAMC1P11047 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC31.89■■■□□ 2.7
LAMC1P11047 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC31.89■■■□□ 2.7
LAMC1P11047 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC31.89■■■□□ 2.7
LAMC1P11047 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC31.89■■■□□ 2.7
LAMC1P11047 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC31.89■■■□□ 2.7
LAMC1P11047 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC31.89■■■□□ 2.7
LAMC1P11047 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC31.89■■■□□ 2.7
LAMC1P11047 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC31.89■■■□□ 2.69
LAMC1P11047 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC31.89■■■□□ 2.69
LAMC1P11047 AC133637.1-201ENST00000624115 1537 ntBASIC31.88■■■□□ 2.69
LAMC1P11047 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
LAMC1P11047 YBX1P1-201ENST00000445822 960 ntBASIC31.88■■■□□ 2.69
LAMC1P11047 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC31.88■■■□□ 2.69
LAMC1P11047 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC31.88■■■□□ 2.69
LAMC1P11047 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
LAMC1P11047 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC31.87■■■□□ 2.69
LAMC1P11047 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC31.87■■■□□ 2.69
LAMC1P11047 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
LAMC1P11047 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC31.86■■■□□ 2.69
LAMC1P11047 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC31.86■■■□□ 2.69
LAMC1P11047 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC31.86■■■□□ 2.69
LAMC1P11047 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
LAMC1P11047 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
LAMC1P11047 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
LAMC1P11047 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC31.85■■■□□ 2.69
LAMC1P11047 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC31.85■■■□□ 2.69
LAMC1P11047 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
LAMC1P11047 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
LAMC1P11047 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC31.84■■■□□ 2.69
LAMC1P11047 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC31.84■■■□□ 2.69
LAMC1P11047 ID1-201ENST00000376105 1233 ntBASIC31.84■■■□□ 2.69
LAMC1P11047 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
LAMC1P11047 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC31.84■■■□□ 2.69
LAMC1P11047 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC31.83■■■□□ 2.69
LAMC1P11047 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC31.83■■■□□ 2.69
LAMC1P11047 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC31.83■■■□□ 2.69
LAMC1P11047 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC31.83■■■□□ 2.69
LAMC1P11047 AC010525.1-201ENST00000585559 441 ntBASIC31.83■■■□□ 2.69
LAMC1P11047 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC31.82■■■□□ 2.68
LAMC1P11047 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
LAMC1P11047 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC31.82■■■□□ 2.68
LAMC1P11047 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
LAMC1P11047 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC31.82■■■□□ 2.68
LAMC1P11047 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC31.82■■■□□ 2.68
LAMC1P11047 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
LAMC1P11047 MIR572-201ENST00000384983 95 ntBASIC31.82■■■□□ 2.68
LAMC1P11047 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC31.82■■■□□ 2.68
LAMC1P11047 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC31.82■■■□□ 2.68
LAMC1P11047 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
LAMC1P11047 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
LAMC1P11047 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC31.81■■■□□ 2.68
LAMC1P11047 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
LAMC1P11047 ABCB10P4-201ENST00000566803 2184 ntBASIC31.8■■■□□ 2.68
LAMC1P11047 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC31.8■■■□□ 2.68
LAMC1P11047 DUX4L4-201ENST00000566884 1269 ntBASIC31.8■■■□□ 2.68
LAMC1P11047 AL358852.1-201ENST00000623174 1268 ntBASIC31.8■■■□□ 2.68
LAMC1P11047 AC144652.1-201ENST00000609974 1624 ntBASIC31.8■■■□□ 2.68
LAMC1P11047 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC31.79■■■□□ 2.68
LAMC1P11047 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
Retrieved 100 of 98,524 protein–RNA pairs in 15.6 ms