Protein–RNA interactions for Protein: P10147

CCL3, C-C motif chemokine 3, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3P10147 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
CCL3P10147 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CCL3P10147 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
CCL3P10147 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCL3P10147 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CCL3P10147 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC20.4■□□□□ 0.86
CCL3P10147 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
CCL3P10147 HYI-206ENST00000372434 1025 ntTSL 5 BASIC20.4■□□□□ 0.86
CCL3P10147 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC20.4■□□□□ 0.86
CCL3P10147 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CCL3P10147 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
CCL3P10147 AC091305.1-201ENST00000479476 895 ntBASIC20.4■□□□□ 0.86
CCL3P10147 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC20.4■□□□□ 0.86
CCL3P10147 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
CCL3P10147 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC20.4■□□□□ 0.86
CCL3P10147 AC093323.1-202ENST00000635031 2045 ntBASIC20.39■□□□□ 0.86
CCL3P10147 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CCL3P10147 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CCL3P10147 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.86
CCL3P10147 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CCL3P10147 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
CCL3P10147 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.86
CCL3P10147 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
CCL3P10147 AC027682.1-201ENST00000562846 899 ntBASIC20.39■□□□□ 0.85
CCL3P10147 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CCL3P10147 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CCL3P10147 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
CCL3P10147 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC20.39■□□□□ 0.85
CCL3P10147 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CCL3P10147 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC20.38■□□□□ 0.85
CCL3P10147 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCL3P10147 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCL3P10147 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCL3P10147 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCL3P10147 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC20.38■□□□□ 0.85
CCL3P10147 ZNRF2P3-201ENST00000424200 374 ntBASIC20.38■□□□□ 0.85
CCL3P10147 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CCL3P10147 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC20.38■□□□□ 0.85
CCL3P10147 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
CCL3P10147 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CCL3P10147 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
CCL3P10147 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CCL3P10147 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
CCL3P10147 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CCL3P10147 GUK1-205ENST00000366722 850 ntTSL 3 BASIC20.37■□□□□ 0.85
CCL3P10147 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CCL3P10147 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC20.37■□□□□ 0.85
CCL3P10147 AC099791.1-201ENST00000416440 715 ntBASIC20.37■□□□□ 0.85
CCL3P10147 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CCL3P10147 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC20.37■□□□□ 0.85
CCL3P10147 CA15P2-201ENST00000611168 834 ntBASIC20.37■□□□□ 0.85
CCL3P10147 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CCL3P10147 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
CCL3P10147 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC20.37■□□□□ 0.85
CCL3P10147 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CCL3P10147 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
CCL3P10147 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CCL3P10147 RASA4CP-201ENST00000424092 1398 ntBASIC20.36■□□□□ 0.85
CCL3P10147 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CCL3P10147 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CCL3P10147 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC20.36■□□□□ 0.85
CCL3P10147 AL353803.4-201ENST00000565882 1934 ntBASIC20.36■□□□□ 0.85
CCL3P10147 SNX3-202ENST00000349379 890 ntTSL 2 BASIC20.36■□□□□ 0.85
CCL3P10147 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CCL3P10147 BX842568.3-201ENST00000418104 571 ntBASIC20.36■□□□□ 0.85
CCL3P10147 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC20.36■□□□□ 0.85
CCL3P10147 AC105265.2-201ENST00000467189 838 ntBASIC20.36■□□□□ 0.85
CCL3P10147 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC20.36■□□□□ 0.85
CCL3P10147 AC233992.3-201ENST00000607491 485 ntBASIC20.36■□□□□ 0.85
CCL3P10147 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CCL3P10147 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CCL3P10147 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
CCL3P10147 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC20.36■□□□□ 0.85
CCL3P10147 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CCL3P10147 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CCL3P10147 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC20.35■□□□□ 0.85
CCL3P10147 SLC47A1P1-202ENST00000449666 945 ntBASIC20.35■□□□□ 0.85
CCL3P10147 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC20.35■□□□□ 0.85
CCL3P10147 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC20.35■□□□□ 0.85
CCL3P10147 STOX2-205ENST00000513034 807 ntTSL 3 BASIC20.35■□□□□ 0.85
CCL3P10147 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
CCL3P10147 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC20.35■□□□□ 0.85
CCL3P10147 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CCL3P10147 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CCL3P10147 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
CCL3P10147 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC20.35■□□□□ 0.85
CCL3P10147 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CCL3P10147 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC20.35■□□□□ 0.85
CCL3P10147 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
CCL3P10147 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CCL3P10147 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CCL3P10147 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC20.34■□□□□ 0.85
CCL3P10147 MIR935-201ENST00000401179 91 ntBASIC20.34■□□□□ 0.85
CCL3P10147 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
CCL3P10147 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC20.33■□□□□ 0.85
CCL3P10147 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC20.33■□□□□ 0.85
CCL3P10147 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CCL3P10147 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC20.33■□□□□ 0.84
CCL3P10147 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC20.33■□□□□ 0.84
CCL3P10147 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms