Protein–RNA interactions for Protein: P0DKX0

ZNF728, Zinc finger protein 728, humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF728P0DKX0 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
ZNF728P0DKX0 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
ZNF728P0DKX0 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ZNF728P0DKX0 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ZNF728P0DKX0 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC18.91■□□□□ 0.62
ZNF728P0DKX0 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ZNF728P0DKX0 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ZNF728P0DKX0 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
ZNF728P0DKX0 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
ZNF728P0DKX0 SENP5-202ENST00000419026 973 ntTSL 3 BASIC18.91■□□□□ 0.62
ZNF728P0DKX0 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC18.91■□□□□ 0.62
ZNF728P0DKX0 MIR4787-201ENST00000607364 84 ntBASIC18.91■□□□□ 0.62
ZNF728P0DKX0 GUSBP5-202ENST00000510805 1989 ntBASIC18.91■□□□□ 0.62
ZNF728P0DKX0 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
ZNF728P0DKX0 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC18.91■□□□□ 0.62
ZNF728P0DKX0 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
ZNF728P0DKX0 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
ZNF728P0DKX0 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
ZNF728P0DKX0 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
ZNF728P0DKX0 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
ZNF728P0DKX0 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
ZNF728P0DKX0 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC18.9■□□□□ 0.62
ZNF728P0DKX0 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC18.9■□□□□ 0.62
ZNF728P0DKX0 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
ZNF728P0DKX0 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ZNF728P0DKX0 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
ZNF728P0DKX0 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ZNF728P0DKX0 LINC00526-201ENST00000581067 1875 ntBASIC18.9■□□□□ 0.62
ZNF728P0DKX0 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
ZNF728P0DKX0 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC18.9■□□□□ 0.62
ZNF728P0DKX0 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC18.89■□□□□ 0.61
ZNF728P0DKX0 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
ZNF728P0DKX0 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
ZNF728P0DKX0 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
ZNF728P0DKX0 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
ZNF728P0DKX0 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ZNF728P0DKX0 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC18.89■□□□□ 0.61
ZNF728P0DKX0 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC18.89■□□□□ 0.61
ZNF728P0DKX0 SNX5-217ENST00000606557 1087 ntBASIC18.89■□□□□ 0.61
ZNF728P0DKX0 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ZNF728P0DKX0 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ZNF728P0DKX0 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
ZNF728P0DKX0 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ZNF728P0DKX0 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ZNF728P0DKX0 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
ZNF728P0DKX0 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
ZNF728P0DKX0 AC092028.1-203ENST00000608262 953 ntBASIC18.88■□□□□ 0.61
ZNF728P0DKX0 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
ZNF728P0DKX0 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ZNF728P0DKX0 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
ZNF728P0DKX0 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC18.88■□□□□ 0.61
ZNF728P0DKX0 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ZNF728P0DKX0 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ZNF728P0DKX0 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ZNF728P0DKX0 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
ZNF728P0DKX0 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ZNF728P0DKX0 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ZNF728P0DKX0 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ZNF728P0DKX0 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ZNF728P0DKX0 HES6-204ENST00000409182 863 ntTSL 2 BASIC18.87■□□□□ 0.61
ZNF728P0DKX0 TERT-206ENST00000508104 2486 ntTSL 5 BASIC18.87■□□□□ 0.61
ZNF728P0DKX0 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC18.87■□□□□ 0.61
ZNF728P0DKX0 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ZNF728P0DKX0 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC18.87■□□□□ 0.61
ZNF728P0DKX0 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC18.87■□□□□ 0.61
ZNF728P0DKX0 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ZNF728P0DKX0 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
ZNF728P0DKX0 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
ZNF728P0DKX0 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
ZNF728P0DKX0 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC18.86■□□□□ 0.61
ZNF728P0DKX0 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
ZNF728P0DKX0 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ZNF728P0DKX0 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ZNF728P0DKX0 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
ZNF728P0DKX0 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC18.86■□□□□ 0.61
ZNF728P0DKX0 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
ZNF728P0DKX0 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
ZNF728P0DKX0 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
ZNF728P0DKX0 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
ZNF728P0DKX0 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
ZNF728P0DKX0 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
ZNF728P0DKX0 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC18.86■□□□□ 0.61
ZNF728P0DKX0 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC18.86■□□□□ 0.61
ZNF728P0DKX0 OR2A1-AS1-204ENST00000470435 602 ntBASIC18.86■□□□□ 0.61
ZNF728P0DKX0 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ZNF728P0DKX0 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ZNF728P0DKX0 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC18.86■□□□□ 0.61
ZNF728P0DKX0 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ZNF728P0DKX0 AC127496.7-201ENST00000625110 1798 ntBASIC18.86■□□□□ 0.61
ZNF728P0DKX0 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ZNF728P0DKX0 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC18.85■□□□□ 0.61
ZNF728P0DKX0 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ZNF728P0DKX0 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC18.85■□□□□ 0.61
ZNF728P0DKX0 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
ZNF728P0DKX0 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC18.85■□□□□ 0.61
ZNF728P0DKX0 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ZNF728P0DKX0 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ZNF728P0DKX0 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
ZNF728P0DKX0 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ZNF728P0DKX0 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC18.85■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms