Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC20.55■□□□□ 0.88
THBS1P07996 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
THBS1P07996 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
THBS1P07996 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
THBS1P07996 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC20.55■□□□□ 0.88
THBS1P07996 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
THBS1P07996 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
THBS1P07996 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
THBS1P07996 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
THBS1P07996 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
THBS1P07996 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC20.54■□□□□ 0.88
THBS1P07996 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
THBS1P07996 AC239859.2-201ENST00000444165 318 ntBASIC20.54■□□□□ 0.88
THBS1P07996 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
THBS1P07996 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
THBS1P07996 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
THBS1P07996 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
THBS1P07996 LINC01529-204ENST00000636474 1715 ntBASIC20.53■□□□□ 0.88
THBS1P07996 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
THBS1P07996 EXOG-217ENST00000630638 197 ntTSL 5 BASIC20.53■□□□□ 0.88
THBS1P07996 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
THBS1P07996 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
THBS1P07996 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
THBS1P07996 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
THBS1P07996 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
THBS1P07996 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
THBS1P07996 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
THBS1P07996 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
THBS1P07996 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC20.52■□□□□ 0.88
THBS1P07996 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC20.52■□□□□ 0.88
THBS1P07996 CD72-202ENST00000378430 585 ntTSL 3 BASIC20.52■□□□□ 0.88
THBS1P07996 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
THBS1P07996 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
THBS1P07996 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
THBS1P07996 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
THBS1P07996 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC20.52■□□□□ 0.87
THBS1P07996 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC20.52■□□□□ 0.87
THBS1P07996 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
THBS1P07996 COMT-203ENST00000403184 2217 ntTSL 2 BASIC20.51■□□□□ 0.87
THBS1P07996 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
THBS1P07996 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC20.51■□□□□ 0.87
THBS1P07996 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
THBS1P07996 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
THBS1P07996 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
THBS1P07996 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
THBS1P07996 AC010997.5-201ENST00000609182 354 ntBASIC20.51■□□□□ 0.87
THBS1P07996 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
THBS1P07996 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC20.51■□□□□ 0.87
THBS1P07996 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
THBS1P07996 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC20.5■□□□□ 0.87
THBS1P07996 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
THBS1P07996 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
THBS1P07996 TFPT-201ENST00000391757 774 ntTSL 5 BASIC20.5■□□□□ 0.87
THBS1P07996 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
THBS1P07996 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC20.5■□□□□ 0.87
THBS1P07996 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC20.5■□□□□ 0.87
THBS1P07996 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
THBS1P07996 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
THBS1P07996 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
THBS1P07996 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
THBS1P07996 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC20.5■□□□□ 0.87
THBS1P07996 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
THBS1P07996 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
THBS1P07996 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
THBS1P07996 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
THBS1P07996 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC20.49■□□□□ 0.87
THBS1P07996 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
THBS1P07996 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
THBS1P07996 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
THBS1P07996 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC20.49■□□□□ 0.87
THBS1P07996 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
THBS1P07996 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
THBS1P07996 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
THBS1P07996 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
THBS1P07996 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC20.49■□□□□ 0.87
THBS1P07996 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
THBS1P07996 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
THBS1P07996 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
THBS1P07996 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC20.48■□□□□ 0.87
THBS1P07996 GUSBP5-202ENST00000510805 1989 ntBASIC20.48■□□□□ 0.87
THBS1P07996 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
THBS1P07996 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
THBS1P07996 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
THBS1P07996 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
THBS1P07996 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
THBS1P07996 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
THBS1P07996 ASB1-202ENST00000409297 878 ntTSL 5 BASIC20.48■□□□□ 0.87
THBS1P07996 DUX4L4-201ENST00000566884 1269 ntBASIC20.48■□□□□ 0.87
THBS1P07996 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
THBS1P07996 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
THBS1P07996 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
THBS1P07996 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
THBS1P07996 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
THBS1P07996 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
THBS1P07996 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
THBS1P07996 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
THBS1P07996 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
THBS1P07996 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
THBS1P07996 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC20.47■□□□□ 0.87
THBS1P07996 AC009102.2-201ENST00000606772 1639 ntBASIC20.47■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms