Protein–RNA interactions for Protein: P05067

APP, Amyloid-beta A4 protein, humanhuman

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APPP05067 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC26.72■■□□□ 1.87
APPP05067 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC26.72■■□□□ 1.87
APPP05067 AC024257.2-201ENST00000549699 147 ntBASIC26.72■■□□□ 1.87
APPP05067 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC26.72■■□□□ 1.87
APPP05067 MIR3181-201ENST00000578512 73 ntBASIC26.72■■□□□ 1.87
APPP05067 pRNA.6-201ENST00000610482 90 ntBASIC26.72■■□□□ 1.87
APPP05067 pRNA.5-201ENST00000612139 90 ntBASIC26.72■■□□□ 1.87
APPP05067 pRNA.11-201ENST00000618423 90 ntBASIC26.72■■□□□ 1.87
APPP05067 pRNA.13-201ENST00000619112 90 ntBASIC26.72■■□□□ 1.87
APPP05067 SF1-220ENST00000626028 704 ntTSL 2 BASIC26.72■■□□□ 1.87
APPP05067 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC26.72■■□□□ 1.87
APPP05067 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
APPP05067 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
APPP05067 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC26.71■■□□□ 1.87
APPP05067 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC26.71■■□□□ 1.87
APPP05067 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC26.71■■□□□ 1.87
APPP05067 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC26.7■■□□□ 1.87
APPP05067 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.87
APPP05067 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC26.7■■□□□ 1.87
APPP05067 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC26.7■■□□□ 1.87
APPP05067 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
APPP05067 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC26.7■■□□□ 1.86
APPP05067 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
APPP05067 AC106739.1-201ENST00000617035 715 ntBASIC26.7■■□□□ 1.86
APPP05067 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC26.7■■□□□ 1.86
APPP05067 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
APPP05067 AL353803.4-201ENST00000565882 1934 ntBASIC26.7■■□□□ 1.86
APPP05067 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC26.7■■□□□ 1.86
APPP05067 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC26.7■■□□□ 1.86
APPP05067 GTSE1-AS1-202ENST00000623117 1518 ntBASIC26.7■■□□□ 1.86
APPP05067 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
APPP05067 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC26.69■■□□□ 1.86
APPP05067 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
APPP05067 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC26.69■■□□□ 1.86
APPP05067 DUX4L4-201ENST00000566884 1269 ntBASIC26.69■■□□□ 1.86
APPP05067 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC26.69■■□□□ 1.86
APPP05067 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC26.69■■□□□ 1.86
APPP05067 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
APPP05067 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC26.68■■□□□ 1.86
APPP05067 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC26.68■■□□□ 1.86
APPP05067 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC26.68■■□□□ 1.86
APPP05067 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
APPP05067 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
APPP05067 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC26.68■■□□□ 1.86
APPP05067 HES6-206ENST00000409574 738 ntTSL 2 BASIC26.68■■□□□ 1.86
APPP05067 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
APPP05067 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC26.68■■□□□ 1.86
APPP05067 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
APPP05067 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC26.67■■□□□ 1.86
APPP05067 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC26.67■■□□□ 1.86
APPP05067 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC26.67■■□□□ 1.86
APPP05067 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
APPP05067 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC26.67■■□□□ 1.86
APPP05067 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
APPP05067 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
APPP05067 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC26.66■■□□□ 1.86
APPP05067 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC26.66■■□□□ 1.86
APPP05067 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC26.66■■□□□ 1.86
APPP05067 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC26.66■■□□□ 1.86
APPP05067 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC26.66■■□□□ 1.86
APPP05067 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
APPP05067 MIR638-201ENST00000385237 100 ntBASIC26.66■■□□□ 1.86
APPP05067 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC26.66■■□□□ 1.86
APPP05067 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC26.66■■□□□ 1.86
APPP05067 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC26.66■■□□□ 1.86
APPP05067 AL138724.1-201ENST00000606771 1088 ntBASIC26.66■■□□□ 1.86
APPP05067 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC26.66■■□□□ 1.86
APPP05067 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC26.66■■□□□ 1.86
APPP05067 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC26.66■■□□□ 1.86
APPP05067 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC26.66■■□□□ 1.86
APPP05067 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC26.65■■□□□ 1.86
APPP05067 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC26.65■■□□□ 1.86
APPP05067 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
APPP05067 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
APPP05067 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC26.65■■□□□ 1.86
APPP05067 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
APPP05067 PTMA-205ENST00000410064 814 ntTSL 2 BASIC26.65■■□□□ 1.86
APPP05067 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC26.65■■□□□ 1.86
APPP05067 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC26.65■■□□□ 1.86
APPP05067 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
APPP05067 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC26.65■■□□□ 1.86
APPP05067 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC26.65■■□□□ 1.86
APPP05067 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC26.65■■□□□ 1.86
APPP05067 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
APPP05067 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC26.64■■□□□ 1.86
APPP05067 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
APPP05067 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
APPP05067 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC26.64■■□□□ 1.85
APPP05067 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC26.64■■□□□ 1.85
APPP05067 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC26.64■■□□□ 1.85
APPP05067 MIR4767-201ENST00000582827 78 ntBASIC26.63■■□□□ 1.85
APPP05067 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC26.63■■□□□ 1.85
APPP05067 AC011298.3-201ENST00000615796 283 ntBASIC26.63■■□□□ 1.85
APPP05067 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
APPP05067 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
APPP05067 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC26.63■■□□□ 1.85
APPP05067 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC26.62■■□□□ 1.85
APPP05067 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC26.62■■□□□ 1.85
APPP05067 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC26.62■■□□□ 1.85
APPP05067 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms