Protein–RNA interactions for Protein: P04908

HIST1H2AB, Histone H2A type 1-B/E, humanhuman

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2ABP04908 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
HIST1H2ABP04908 AC079630.1-202ENST00000618127 1840 ntBASIC20.26■□□□□ 0.83
HIST1H2ABP04908 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
HIST1H2ABP04908 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
HIST1H2ABP04908 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
HIST1H2ABP04908 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
HIST1H2ABP04908 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
HIST1H2ABP04908 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC20.25■□□□□ 0.83
HIST1H2ABP04908 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
HIST1H2ABP04908 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
HIST1H2ABP04908 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC20.25■□□□□ 0.83
HIST1H2ABP04908 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
HIST1H2ABP04908 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC20.25■□□□□ 0.83
HIST1H2ABP04908 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC20.25■□□□□ 0.83
HIST1H2ABP04908 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC20.25■□□□□ 0.83
HIST1H2ABP04908 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
HIST1H2ABP04908 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
HIST1H2ABP04908 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
HIST1H2ABP04908 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
HIST1H2ABP04908 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
HIST1H2ABP04908 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
HIST1H2ABP04908 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
HIST1H2ABP04908 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
HIST1H2ABP04908 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC20.24■□□□□ 0.83
HIST1H2ABP04908 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
HIST1H2ABP04908 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
HIST1H2ABP04908 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC20.24■□□□□ 0.83
HIST1H2ABP04908 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
HIST1H2ABP04908 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC20.24■□□□□ 0.83
HIST1H2ABP04908 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
HIST1H2ABP04908 AC092028.1-203ENST00000608262 953 ntBASIC20.24■□□□□ 0.83
HIST1H2ABP04908 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
HIST1H2ABP04908 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
HIST1H2ABP04908 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
HIST1H2ABP04908 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
HIST1H2ABP04908 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
HIST1H2ABP04908 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
HIST1H2ABP04908 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
HIST1H2ABP04908 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC20.23■□□□□ 0.83
HIST1H2ABP04908 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
HIST1H2ABP04908 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
HIST1H2ABP04908 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.23■□□□□ 0.83
HIST1H2ABP04908 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
HIST1H2ABP04908 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
HIST1H2ABP04908 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
HIST1H2ABP04908 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC20.23■□□□□ 0.83
HIST1H2ABP04908 MIR4787-201ENST00000607364 84 ntBASIC20.23■□□□□ 0.83
HIST1H2ABP04908 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC20.23■□□□□ 0.83
HIST1H2ABP04908 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC20.23■□□□□ 0.83
HIST1H2ABP04908 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
HIST1H2ABP04908 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
HIST1H2ABP04908 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
HIST1H2ABP04908 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
HIST1H2ABP04908 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
HIST1H2ABP04908 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
HIST1H2ABP04908 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
HIST1H2ABP04908 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
HIST1H2ABP04908 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
HIST1H2ABP04908 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
HIST1H2ABP04908 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC20.22■□□□□ 0.83
HIST1H2ABP04908 AC239859.2-201ENST00000444165 318 ntBASIC20.22■□□□□ 0.83
HIST1H2ABP04908 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
HIST1H2ABP04908 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC20.22■□□□□ 0.83
HIST1H2ABP04908 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
HIST1H2ABP04908 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC20.22■□□□□ 0.83
HIST1H2ABP04908 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
HIST1H2ABP04908 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
HIST1H2ABP04908 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
HIST1H2ABP04908 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
HIST1H2ABP04908 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
HIST1H2ABP04908 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
HIST1H2ABP04908 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
HIST1H2ABP04908 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC20.2■□□□□ 0.82
HIST1H2ABP04908 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC20.2■□□□□ 0.82
HIST1H2ABP04908 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
HIST1H2ABP04908 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
HIST1H2ABP04908 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
HIST1H2ABP04908 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
HIST1H2ABP04908 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
HIST1H2ABP04908 MTDHP2-201ENST00000601468 714 ntBASIC20.2■□□□□ 0.82
HIST1H2ABP04908 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
HIST1H2ABP04908 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
HIST1H2ABP04908 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
HIST1H2ABP04908 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
HIST1H2ABP04908 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
HIST1H2ABP04908 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
HIST1H2ABP04908 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC20.2■□□□□ 0.82
HIST1H2ABP04908 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
HIST1H2ABP04908 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC20.19■□□□□ 0.82
HIST1H2ABP04908 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
HIST1H2ABP04908 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
HIST1H2ABP04908 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC20.19■□□□□ 0.82
HIST1H2ABP04908 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
HIST1H2ABP04908 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC20.19■□□□□ 0.82
HIST1H2ABP04908 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
HIST1H2ABP04908 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC20.19■□□□□ 0.82
HIST1H2ABP04908 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
HIST1H2ABP04908 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
HIST1H2ABP04908 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
HIST1H2ABP04908 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms