Protein–RNA interactions for Protein: P04433

IGKV3-11, Immunoglobulin kappa variable 3-11, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV3-11P04433 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
IGKV3-11P04433 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
IGKV3-11P04433 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
IGKV3-11P04433 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC20.71■□□□□ 0.91
IGKV3-11P04433 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
IGKV3-11P04433 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
IGKV3-11P04433 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC20.7■□□□□ 0.9
IGKV3-11P04433 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
IGKV3-11P04433 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
IGKV3-11P04433 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC20.7■□□□□ 0.9
IGKV3-11P04433 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
IGKV3-11P04433 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC20.7■□□□□ 0.9
IGKV3-11P04433 AL136162.1-201ENST00000607711 1078 ntBASIC20.7■□□□□ 0.9
IGKV3-11P04433 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
IGKV3-11P04433 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC20.7■□□□□ 0.9
IGKV3-11P04433 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
IGKV3-11P04433 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
IGKV3-11P04433 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC20.69■□□□□ 0.9
IGKV3-11P04433 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC20.69■□□□□ 0.9
IGKV3-11P04433 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC20.69■□□□□ 0.9
IGKV3-11P04433 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
IGKV3-11P04433 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
IGKV3-11P04433 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC20.69■□□□□ 0.9
IGKV3-11P04433 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
IGKV3-11P04433 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
IGKV3-11P04433 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
IGKV3-11P04433 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
IGKV3-11P04433 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC20.69■□□□□ 0.9
IGKV3-11P04433 HES6-206ENST00000409574 738 ntTSL 2 BASIC20.69■□□□□ 0.9
IGKV3-11P04433 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
IGKV3-11P04433 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC20.69■□□□□ 0.9
IGKV3-11P04433 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC20.69■□□□□ 0.9
IGKV3-11P04433 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
IGKV3-11P04433 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC20.69■□□□□ 0.9
IGKV3-11P04433 DUSP8P3-201ENST00000399571 1760 ntBASIC20.69■□□□□ 0.9
IGKV3-11P04433 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
IGKV3-11P04433 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
IGKV3-11P04433 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
IGKV3-11P04433 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
IGKV3-11P04433 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC20.68■□□□□ 0.9
IGKV3-11P04433 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
IGKV3-11P04433 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
IGKV3-11P04433 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
IGKV3-11P04433 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC20.68■□□□□ 0.9
IGKV3-11P04433 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
IGKV3-11P04433 AC024257.2-201ENST00000549699 147 ntBASIC20.68■□□□□ 0.9
IGKV3-11P04433 AC106739.1-201ENST00000617035 715 ntBASIC20.68■□□□□ 0.9
IGKV3-11P04433 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC20.68■□□□□ 0.9
IGKV3-11P04433 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
IGKV3-11P04433 AC135279.3-201ENST00000610945 1311 ntBASIC20.68■□□□□ 0.9
IGKV3-11P04433 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC20.68■□□□□ 0.9
IGKV3-11P04433 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC20.68■□□□□ 0.9
IGKV3-11P04433 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
IGKV3-11P04433 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
IGKV3-11P04433 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
IGKV3-11P04433 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC20.67■□□□□ 0.9
IGKV3-11P04433 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
IGKV3-11P04433 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
IGKV3-11P04433 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC20.67■□□□□ 0.9
IGKV3-11P04433 AC136469.2-201ENST00000623944 1028 ntBASIC20.67■□□□□ 0.9
IGKV3-11P04433 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
IGKV3-11P04433 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC20.67■□□□□ 0.9
IGKV3-11P04433 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
IGKV3-11P04433 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
IGKV3-11P04433 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
IGKV3-11P04433 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC20.67■□□□□ 0.9
IGKV3-11P04433 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC20.67■□□□□ 0.9
IGKV3-11P04433 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
IGKV3-11P04433 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC20.66■□□□□ 0.9
IGKV3-11P04433 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
IGKV3-11P04433 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
IGKV3-11P04433 MTURN-203ENST00000409688 843 ntTSL 2 BASIC20.66■□□□□ 0.9
IGKV3-11P04433 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC20.66■□□□□ 0.9
IGKV3-11P04433 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC20.66■□□□□ 0.9
IGKV3-11P04433 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
IGKV3-11P04433 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
IGKV3-11P04433 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
IGKV3-11P04433 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
IGKV3-11P04433 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
IGKV3-11P04433 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
IGKV3-11P04433 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
IGKV3-11P04433 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
IGKV3-11P04433 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
IGKV3-11P04433 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
IGKV3-11P04433 AC133637.1-201ENST00000624115 1537 ntBASIC20.65■□□□□ 0.9
IGKV3-11P04433 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
IGKV3-11P04433 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
IGKV3-11P04433 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC20.65■□□□□ 0.9
IGKV3-11P04433 PBX2P1-201ENST00000493219 1291 ntBASIC20.65■□□□□ 0.9
IGKV3-11P04433 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC20.65■□□□□ 0.9
IGKV3-11P04433 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC20.65■□□□□ 0.9
IGKV3-11P04433 AC133561.4-201ENST00000566112 224 ntBASIC20.65■□□□□ 0.9
IGKV3-11P04433 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
IGKV3-11P04433 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
IGKV3-11P04433 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
IGKV3-11P04433 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
IGKV3-11P04433 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
IGKV3-11P04433 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC20.64■□□□□ 0.89
IGKV3-11P04433 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
IGKV3-11P04433 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms