Protein–RNA interactions for Protein: P02647

APOA1, Apolipoprotein A-I, humanhuman

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA1P02647 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
APOA1P02647 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.77
APOA1P02647 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC19.83■□□□□ 0.77
APOA1P02647 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.76
APOA1P02647 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
APOA1P02647 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
APOA1P02647 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC19.83■□□□□ 0.76
APOA1P02647 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
APOA1P02647 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
APOA1P02647 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
APOA1P02647 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
APOA1P02647 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
APOA1P02647 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
APOA1P02647 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
APOA1P02647 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
APOA1P02647 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
APOA1P02647 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
APOA1P02647 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
APOA1P02647 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC19.82■□□□□ 0.76
APOA1P02647 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
APOA1P02647 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
APOA1P02647 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC19.82■□□□□ 0.76
APOA1P02647 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
APOA1P02647 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
APOA1P02647 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
APOA1P02647 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
APOA1P02647 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC19.82■□□□□ 0.76
APOA1P02647 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
APOA1P02647 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
APOA1P02647 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
APOA1P02647 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
APOA1P02647 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
APOA1P02647 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC19.81■□□□□ 0.76
APOA1P02647 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
APOA1P02647 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
APOA1P02647 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
APOA1P02647 HES6-205ENST00000409356 528 ntTSL 2 BASIC19.81■□□□□ 0.76
APOA1P02647 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
APOA1P02647 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
APOA1P02647 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC19.81■□□□□ 0.76
APOA1P02647 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
APOA1P02647 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC19.81■□□□□ 0.76
APOA1P02647 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC19.81■□□□□ 0.76
APOA1P02647 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
APOA1P02647 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC19.8■□□□□ 0.76
APOA1P02647 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
APOA1P02647 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
APOA1P02647 HGH1-207ENST00000628266 258 ntTSL 5 BASIC19.8■□□□□ 0.76
APOA1P02647 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
APOA1P02647 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
APOA1P02647 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
APOA1P02647 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
APOA1P02647 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
APOA1P02647 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
APOA1P02647 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
APOA1P02647 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC19.79■□□□□ 0.76
APOA1P02647 ESRRAP2-201ENST00000418437 1549 ntBASIC19.79■□□□□ 0.76
APOA1P02647 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
APOA1P02647 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
APOA1P02647 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
APOA1P02647 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC19.78■□□□□ 0.76
APOA1P02647 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
APOA1P02647 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
APOA1P02647 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
APOA1P02647 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC19.78■□□□□ 0.76
APOA1P02647 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
APOA1P02647 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
APOA1P02647 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
APOA1P02647 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
APOA1P02647 MIR3960-201ENST00000583311 91 ntBASIC19.78■□□□□ 0.76
APOA1P02647 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC19.78■□□□□ 0.76
APOA1P02647 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
APOA1P02647 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC19.78■□□□□ 0.76
APOA1P02647 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
APOA1P02647 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
APOA1P02647 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
APOA1P02647 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
APOA1P02647 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
APOA1P02647 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
APOA1P02647 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
APOA1P02647 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC19.77■□□□□ 0.76
APOA1P02647 DUX4L11-201ENST00000611504 1267 ntBASIC19.77■□□□□ 0.76
APOA1P02647 DUX4L12-201ENST00000614593 1267 ntBASIC19.77■□□□□ 0.76
APOA1P02647 DUX4L14-201ENST00000621227 1267 ntBASIC19.77■□□□□ 0.76
APOA1P02647 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
APOA1P02647 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
APOA1P02647 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
APOA1P02647 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
APOA1P02647 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
APOA1P02647 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
APOA1P02647 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC19.76■□□□□ 0.75
APOA1P02647 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
APOA1P02647 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
APOA1P02647 AC025884.2-201ENST00000553429 711 ntBASIC19.76■□□□□ 0.75
APOA1P02647 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
APOA1P02647 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
APOA1P02647 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
APOA1P02647 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
APOA1P02647 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC19.76■□□□□ 0.75
APOA1P02647 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms