Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC25.16■■□□□ 1.62
GGPS1O95749 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC25.16■■□□□ 1.62
GGPS1O95749 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
GGPS1O95749 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC25.16■■□□□ 1.62
GGPS1O95749 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC25.16■■□□□ 1.62
GGPS1O95749 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
GGPS1O95749 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
GGPS1O95749 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
GGPS1O95749 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
GGPS1O95749 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC25.15■■□□□ 1.62
GGPS1O95749 AL139125.2-201ENST00000623134 1869 ntBASIC25.15■■□□□ 1.62
GGPS1O95749 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
GGPS1O95749 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC25.15■■□□□ 1.62
GGPS1O95749 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC25.15■■□□□ 1.62
GGPS1O95749 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
GGPS1O95749 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC25.15■■□□□ 1.62
GGPS1O95749 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC25.14■■□□□ 1.62
GGPS1O95749 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC25.14■■□□□ 1.62
GGPS1O95749 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC25.14■■□□□ 1.62
GGPS1O95749 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC25.14■■□□□ 1.62
GGPS1O95749 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC25.14■■□□□ 1.62
GGPS1O95749 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC25.14■■□□□ 1.62
GGPS1O95749 AC087623.3-201ENST00000607047 1098 ntBASIC25.14■■□□□ 1.62
GGPS1O95749 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC25.14■■□□□ 1.62
GGPS1O95749 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC25.14■■□□□ 1.61
GGPS1O95749 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC25.14■■□□□ 1.61
GGPS1O95749 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC25.14■■□□□ 1.61
GGPS1O95749 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
GGPS1O95749 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
GGPS1O95749 TSPY26P-201ENST00000476365 1326 ntBASIC25.13■■□□□ 1.61
GGPS1O95749 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC25.13■■□□□ 1.61
GGPS1O95749 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC25.13■■□□□ 1.61
GGPS1O95749 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC25.13■■□□□ 1.61
GGPS1O95749 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC25.13■■□□□ 1.61
GGPS1O95749 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
GGPS1O95749 AC004812.2-201ENST00000611079 2094 ntBASIC25.13■■□□□ 1.61
GGPS1O95749 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
GGPS1O95749 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
GGPS1O95749 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC25.13■■□□□ 1.61
GGPS1O95749 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC25.13■■□□□ 1.61
GGPS1O95749 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC25.13■■□□□ 1.61
GGPS1O95749 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC25.13■■□□□ 1.61
GGPS1O95749 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC25.13■■□□□ 1.61
GGPS1O95749 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC25.13■■□□□ 1.61
GGPS1O95749 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
GGPS1O95749 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC25.12■■□□□ 1.61
GGPS1O95749 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
GGPS1O95749 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC25.12■■□□□ 1.61
GGPS1O95749 LINC01529-204ENST00000636474 1715 ntBASIC25.12■■□□□ 1.61
GGPS1O95749 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
GGPS1O95749 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
GGPS1O95749 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
GGPS1O95749 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
GGPS1O95749 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC25.12■■□□□ 1.61
GGPS1O95749 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC25.12■■□□□ 1.61
GGPS1O95749 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
GGPS1O95749 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC25.12■■□□□ 1.61
GGPS1O95749 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
GGPS1O95749 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC25.12■■□□□ 1.61
GGPS1O95749 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC25.11■■□□□ 1.61
GGPS1O95749 PLD4-205ENST00000553861 667 ntTSL 2 BASIC25.11■■□□□ 1.61
GGPS1O95749 AC010525.1-201ENST00000585559 441 ntBASIC25.11■■□□□ 1.61
GGPS1O95749 AC092666.2-201ENST00000613287 246 ntBASIC25.11■■□□□ 1.61
GGPS1O95749 ANKRD20A6P-201ENST00000618763 204 ntBASIC25.11■■□□□ 1.61
GGPS1O95749 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC25.11■■□□□ 1.61
GGPS1O95749 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC25.11■■□□□ 1.61
GGPS1O95749 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
GGPS1O95749 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
GGPS1O95749 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC25.1■■□□□ 1.61
GGPS1O95749 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
GGPS1O95749 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
GGPS1O95749 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC25.1■■□□□ 1.61
GGPS1O95749 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC25.1■■□□□ 1.61
GGPS1O95749 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC25.1■■□□□ 1.61
GGPS1O95749 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
GGPS1O95749 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC25.1■■□□□ 1.61
GGPS1O95749 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
GGPS1O95749 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
GGPS1O95749 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
GGPS1O95749 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC25.09■■□□□ 1.61
GGPS1O95749 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
GGPS1O95749 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC25.09■■□□□ 1.61
GGPS1O95749 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC25.09■■□□□ 1.61
GGPS1O95749 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
GGPS1O95749 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
GGPS1O95749 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
GGPS1O95749 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC25.08■■□□□ 1.61
GGPS1O95749 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
GGPS1O95749 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC25.08■■□□□ 1.61
GGPS1O95749 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
GGPS1O95749 AICDA-202ENST00000537228 667 ntTSL 5 BASIC25.08■■□□□ 1.61
GGPS1O95749 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
GGPS1O95749 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC25.08■■□□□ 1.61
GGPS1O95749 SP2-202ENST00000613139 908 ntTSL 5 BASIC25.08■■□□□ 1.61
GGPS1O95749 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
GGPS1O95749 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
GGPS1O95749 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC25.08■■□□□ 1.61
GGPS1O95749 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
GGPS1O95749 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC25.07■■□□□ 1.6
GGPS1O95749 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC25.07■■□□□ 1.6
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms