Protein–RNA interactions for Protein: O75387

SLC43A1, Large neutral amino acids transporter small subunit 3, humanhuman

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC43A1O75387 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SLC43A1O75387 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SLC43A1O75387 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
SLC43A1O75387 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SLC43A1O75387 USP48-205ENST00000421625 2818 ntTSL 2 BASIC20.16■□□□□ 0.82
SLC43A1O75387 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
SLC43A1O75387 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC20.15■□□□□ 0.82
SLC43A1O75387 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC20.15■□□□□ 0.82
SLC43A1O75387 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC20.15■□□□□ 0.82
SLC43A1O75387 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SLC43A1O75387 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC20.15■□□□□ 0.82
SLC43A1O75387 KRT16P3-201ENST00000439127 1283 ntBASIC20.15■□□□□ 0.82
SLC43A1O75387 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SLC43A1O75387 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
SLC43A1O75387 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SLC43A1O75387 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
SLC43A1O75387 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
SLC43A1O75387 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
SLC43A1O75387 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SLC43A1O75387 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SLC43A1O75387 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SLC43A1O75387 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
SLC43A1O75387 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SLC43A1O75387 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SLC43A1O75387 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
SLC43A1O75387 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC20.14■□□□□ 0.81
SLC43A1O75387 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC20.14■□□□□ 0.81
SLC43A1O75387 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
SLC43A1O75387 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SLC43A1O75387 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
SLC43A1O75387 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC20.14■□□□□ 0.81
SLC43A1O75387 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SLC43A1O75387 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
SLC43A1O75387 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SLC43A1O75387 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SLC43A1O75387 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SLC43A1O75387 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SLC43A1O75387 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC20.13■□□□□ 0.81
SLC43A1O75387 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC20.13■□□□□ 0.81
SLC43A1O75387 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SLC43A1O75387 CD72-202ENST00000378430 585 ntTSL 3 BASIC20.13■□□□□ 0.81
SLC43A1O75387 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC20.13■□□□□ 0.81
SLC43A1O75387 CLTA-206ENST00000466396 695 ntTSL 2 BASIC20.13■□□□□ 0.81
SLC43A1O75387 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC20.13■□□□□ 0.81
SLC43A1O75387 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
SLC43A1O75387 AC137767.1-201ENST00000602918 1920 ntBASIC20.13■□□□□ 0.81
SLC43A1O75387 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SLC43A1O75387 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SLC43A1O75387 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
SLC43A1O75387 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
SLC43A1O75387 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SLC43A1O75387 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SLC43A1O75387 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SLC43A1O75387 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC20.12■□□□□ 0.81
SLC43A1O75387 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SLC43A1O75387 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SLC43A1O75387 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
SLC43A1O75387 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC20.12■□□□□ 0.81
SLC43A1O75387 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC20.12■□□□□ 0.81
SLC43A1O75387 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC20.12■□□□□ 0.81
SLC43A1O75387 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SLC43A1O75387 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SLC43A1O75387 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC20.11■□□□□ 0.81
SLC43A1O75387 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC20.11■□□□□ 0.81
SLC43A1O75387 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
SLC43A1O75387 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC20.11■□□□□ 0.81
SLC43A1O75387 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
SLC43A1O75387 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SLC43A1O75387 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
SLC43A1O75387 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
SLC43A1O75387 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC20.11■□□□□ 0.81
SLC43A1O75387 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SLC43A1O75387 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC20.11■□□□□ 0.81
SLC43A1O75387 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC20.11■□□□□ 0.81
SLC43A1O75387 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
SLC43A1O75387 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
SLC43A1O75387 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
SLC43A1O75387 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SLC43A1O75387 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SLC43A1O75387 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SLC43A1O75387 TFPT-201ENST00000391757 774 ntTSL 5 BASIC20.1■□□□□ 0.81
SLC43A1O75387 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
SLC43A1O75387 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
SLC43A1O75387 MIR6724-1-201ENST00000616420 92 ntBASIC20.1■□□□□ 0.81
SLC43A1O75387 MIR6724-2-201ENST00000616483 92 ntBASIC20.1■□□□□ 0.81
SLC43A1O75387 MIR6724-4-201ENST00000617390 92 ntBASIC20.1■□□□□ 0.81
SLC43A1O75387 MIR6724-3-201ENST00000622482 92 ntBASIC20.1■□□□□ 0.81
SLC43A1O75387 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SLC43A1O75387 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
SLC43A1O75387 C1orf229-201ENST00000623686 2258 ntBASIC20.1■□□□□ 0.81
SLC43A1O75387 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SLC43A1O75387 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.1■□□□□ 0.81
SLC43A1O75387 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SLC43A1O75387 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC20.09■□□□□ 0.81
SLC43A1O75387 LSM4-201ENST00000252816 986 ntTSL 2 BASIC20.09■□□□□ 0.81
SLC43A1O75387 GRAMD4P7-201ENST00000578182 1232 ntBASIC20.09■□□□□ 0.81
SLC43A1O75387 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SLC43A1O75387 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC20.09■□□□□ 0.81
SLC43A1O75387 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
SLC43A1O75387 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms