Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRIM3O75382 USF2-207ENST00000595068 1612 ntTSL 5 BASIC20.68■□□□□ 0.9
TRIM3O75382 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC20.68■□□□□ 0.9
TRIM3O75382 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
TRIM3O75382 SRD5A1P1-201ENST00000442297 786 ntBASIC20.68■□□□□ 0.9
TRIM3O75382 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
TRIM3O75382 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRIM3O75382 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
TRIM3O75382 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRIM3O75382 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
TRIM3O75382 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC20.68■□□□□ 0.9
TRIM3O75382 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TRIM3O75382 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC20.67■□□□□ 0.9
TRIM3O75382 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC20.67■□□□□ 0.9
TRIM3O75382 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC20.67■□□□□ 0.9
TRIM3O75382 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC20.67■□□□□ 0.9
TRIM3O75382 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRIM3O75382 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRIM3O75382 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRIM3O75382 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRIM3O75382 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TRIM3O75382 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC20.66■□□□□ 0.9
TRIM3O75382 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRIM3O75382 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC20.66■□□□□ 0.9
TRIM3O75382 EI24-213ENST00000618552 1747 ntTSL 5 BASIC20.66■□□□□ 0.9
TRIM3O75382 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC20.66■□□□□ 0.9
TRIM3O75382 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
TRIM3O75382 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRIM3O75382 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRIM3O75382 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRIM3O75382 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC20.65■□□□□ 0.9
TRIM3O75382 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC20.65■□□□□ 0.9
TRIM3O75382 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRIM3O75382 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
TRIM3O75382 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRIM3O75382 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRIM3O75382 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRIM3O75382 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC20.65■□□□□ 0.9
TRIM3O75382 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TRIM3O75382 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TRIM3O75382 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
TRIM3O75382 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
TRIM3O75382 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.9
TRIM3O75382 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
TRIM3O75382 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
TRIM3O75382 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TRIM3O75382 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC20.64■□□□□ 0.89
TRIM3O75382 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC20.64■□□□□ 0.89
TRIM3O75382 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
TRIM3O75382 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC20.64■□□□□ 0.89
TRIM3O75382 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
TRIM3O75382 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
TRIM3O75382 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
TRIM3O75382 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRIM3O75382 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
TRIM3O75382 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TRIM3O75382 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
TRIM3O75382 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRIM3O75382 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRIM3O75382 NALT1-201ENST00000429224 738 ntTSL 5 BASIC20.63■□□□□ 0.89
TRIM3O75382 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC20.63■□□□□ 0.89
TRIM3O75382 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC20.63■□□□□ 0.89
TRIM3O75382 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC20.63■□□□□ 0.89
TRIM3O75382 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TRIM3O75382 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRIM3O75382 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRIM3O75382 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRIM3O75382 C17orf82-201ENST00000623772 1530 ntBASIC20.63■□□□□ 0.89
TRIM3O75382 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRIM3O75382 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TRIM3O75382 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRIM3O75382 ABCB10P4-201ENST00000566803 2184 ntBASIC20.62■□□□□ 0.89
TRIM3O75382 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC20.62■□□□□ 0.89
TRIM3O75382 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TRIM3O75382 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC20.62■□□□□ 0.89
TRIM3O75382 AL139246.5-201ENST00000606645 996 ntBASIC20.62■□□□□ 0.89
TRIM3O75382 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC20.62■□□□□ 0.89
TRIM3O75382 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRIM3O75382 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC20.62■□□□□ 0.89
TRIM3O75382 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRIM3O75382 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC20.62■□□□□ 0.89
TRIM3O75382 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRIM3O75382 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRIM3O75382 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC20.61■□□□□ 0.89
TRIM3O75382 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRIM3O75382 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRIM3O75382 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRIM3O75382 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRIM3O75382 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
TRIM3O75382 AC096631.2-201ENST00000436136 790 ntBASIC20.61■□□□□ 0.89
TRIM3O75382 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC20.61■□□□□ 0.89
TRIM3O75382 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
TRIM3O75382 AC110285.6-201ENST00000617652 491 ntBASIC20.61■□□□□ 0.89
TRIM3O75382 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TRIM3O75382 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRIM3O75382 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRIM3O75382 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC20.6■□□□□ 0.89
TRIM3O75382 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TRIM3O75382 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
TRIM3O75382 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms