Protein–RNA interactions for Protein: O60563

CCNT1, Cyclin-T1, humanhuman

Known RBP Predictions only

Length 726 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1O60563 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC25.38■■□□□ 1.65
CCNT1O60563 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC25.38■■□□□ 1.65
CCNT1O60563 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
CCNT1O60563 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
CCNT1O60563 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
CCNT1O60563 AC241377.3-202ENST00000626088 1088 ntBASIC25.38■■□□□ 1.65
CCNT1O60563 AC241585.3-202ENST00000628937 1088 ntBASIC25.38■■□□□ 1.65
CCNT1O60563 AC245100.8-202ENST00000629247 1058 ntBASIC25.38■■□□□ 1.65
CCNT1O60563 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC25.38■■□□□ 1.65
CCNT1O60563 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
CCNT1O60563 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC25.38■■□□□ 1.65
CCNT1O60563 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC25.37■■□□□ 1.65
CCNT1O60563 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
CCNT1O60563 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
CCNT1O60563 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
CCNT1O60563 DUX4L4-201ENST00000566884 1269 ntBASIC25.37■■□□□ 1.65
CCNT1O60563 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC25.37■■□□□ 1.65
CCNT1O60563 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC25.37■■□□□ 1.65
CCNT1O60563 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC25.37■■□□□ 1.65
CCNT1O60563 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC25.37■■□□□ 1.65
CCNT1O60563 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC25.37■■□□□ 1.65
CCNT1O60563 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC25.36■■□□□ 1.65
CCNT1O60563 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC25.36■■□□□ 1.65
CCNT1O60563 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC25.36■■□□□ 1.65
CCNT1O60563 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC25.36■■□□□ 1.65
CCNT1O60563 RARA-203ENST00000394086 2008 ntTSL 2 BASIC25.36■■□□□ 1.65
CCNT1O60563 AC006455.2-201ENST00000429931 906 ntBASIC25.36■■□□□ 1.65
CCNT1O60563 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
CCNT1O60563 PEMT-206ENST00000435340 960 ntTSL 5 BASIC25.36■■□□□ 1.65
CCNT1O60563 AC009086.3-201ENST00000623486 1008 ntBASIC25.36■■□□□ 1.65
CCNT1O60563 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
CCNT1O60563 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
CCNT1O60563 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC25.35■■□□□ 1.65
CCNT1O60563 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC25.35■■□□□ 1.65
CCNT1O60563 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
CCNT1O60563 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC25.35■■□□□ 1.65
CCNT1O60563 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC25.35■■□□□ 1.65
CCNT1O60563 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC25.35■■□□□ 1.65
CCNT1O60563 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
CCNT1O60563 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC25.34■■□□□ 1.65
CCNT1O60563 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
CCNT1O60563 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC25.34■■□□□ 1.65
CCNT1O60563 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
CCNT1O60563 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC25.34■■□□□ 1.65
CCNT1O60563 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
CCNT1O60563 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
CCNT1O60563 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
CCNT1O60563 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
CCNT1O60563 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
CCNT1O60563 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC25.33■■□□□ 1.65
CCNT1O60563 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
CCNT1O60563 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.64
CCNT1O60563 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC25.33■■□□□ 1.64
CCNT1O60563 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC25.33■■□□□ 1.64
CCNT1O60563 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC25.33■■□□□ 1.64
CCNT1O60563 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
CCNT1O60563 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC25.32■■□□□ 1.64
CCNT1O60563 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
CCNT1O60563 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC25.32■■□□□ 1.64
CCNT1O60563 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
CCNT1O60563 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
CCNT1O60563 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC25.32■■□□□ 1.64
CCNT1O60563 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC25.32■■□□□ 1.64
CCNT1O60563 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
CCNT1O60563 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC25.32■■□□□ 1.64
CCNT1O60563 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC25.32■■□□□ 1.64
CCNT1O60563 C9orf163-202ENST00000624034 2573 ntBASIC25.32■■□□□ 1.64
CCNT1O60563 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC25.31■■□□□ 1.64
CCNT1O60563 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
CCNT1O60563 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC25.31■■□□□ 1.64
CCNT1O60563 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
CCNT1O60563 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC25.31■■□□□ 1.64
CCNT1O60563 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC25.31■■□□□ 1.64
CCNT1O60563 AC092171.4-201ENST00000609130 632 ntBASIC25.31■■□□□ 1.64
CCNT1O60563 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC25.31■■□□□ 1.64
CCNT1O60563 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC25.31■■□□□ 1.64
CCNT1O60563 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
CCNT1O60563 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC25.31■■□□□ 1.64
CCNT1O60563 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC25.3■■□□□ 1.64
CCNT1O60563 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
CCNT1O60563 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC25.3■■□□□ 1.64
CCNT1O60563 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC25.3■■□□□ 1.64
CCNT1O60563 GTSE1-AS1-202ENST00000623117 1518 ntBASIC25.3■■□□□ 1.64
CCNT1O60563 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC25.3■■□□□ 1.64
CCNT1O60563 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC25.3■■□□□ 1.64
CCNT1O60563 ME2-208ENST00000638937 2471 ntTSL 5 BASIC25.29■■□□□ 1.64
CCNT1O60563 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC25.29■■□□□ 1.64
CCNT1O60563 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
CCNT1O60563 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC25.29■■□□□ 1.64
CCNT1O60563 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC25.29■■□□□ 1.64
CCNT1O60563 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC25.29■■□□□ 1.64
CCNT1O60563 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
CCNT1O60563 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
CCNT1O60563 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC25.29■■□□□ 1.64
CCNT1O60563 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC25.29■■□□□ 1.64
CCNT1O60563 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC25.29■■□□□ 1.64
CCNT1O60563 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC25.29■■□□□ 1.64
CCNT1O60563 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
CCNT1O60563 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC25.28■■□□□ 1.64
CCNT1O60563 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC25.28■■□□□ 1.64
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms