Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
LCMT2O60294 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
LCMT2O60294 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
LCMT2O60294 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
LCMT2O60294 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
LCMT2O60294 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
LCMT2O60294 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
LCMT2O60294 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC21.38■■□□□ 1.01
LCMT2O60294 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC21.38■■□□□ 1.01
LCMT2O60294 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
LCMT2O60294 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC21.38■■□□□ 1.01
LCMT2O60294 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
LCMT2O60294 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC21.37■■□□□ 1.01
LCMT2O60294 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
LCMT2O60294 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
LCMT2O60294 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC21.37■■□□□ 1.01
LCMT2O60294 AC006455.2-201ENST00000429931 906 ntBASIC21.37■■□□□ 1.01
LCMT2O60294 PEMT-206ENST00000435340 960 ntTSL 5 BASIC21.37■■□□□ 1.01
LCMT2O60294 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC21.37■■□□□ 1.01
LCMT2O60294 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
LCMT2O60294 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC21.37■■□□□ 1.01
LCMT2O60294 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
LCMT2O60294 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
LCMT2O60294 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
LCMT2O60294 RARA-203ENST00000394086 2008 ntTSL 2 BASIC21.36■■□□□ 1.01
LCMT2O60294 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
LCMT2O60294 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
LCMT2O60294 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
LCMT2O60294 C9orf163-202ENST00000624034 2573 ntBASIC21.36■■□□□ 1.01
LCMT2O60294 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC21.36■■□□□ 1.01
LCMT2O60294 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC21.36■■□□□ 1.01
LCMT2O60294 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC21.36■■□□□ 1.01
LCMT2O60294 AC241377.3-202ENST00000626088 1088 ntBASIC21.36■■□□□ 1.01
LCMT2O60294 AC241585.3-202ENST00000628937 1088 ntBASIC21.36■■□□□ 1.01
LCMT2O60294 AC245100.8-202ENST00000629247 1058 ntBASIC21.36■■□□□ 1.01
LCMT2O60294 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
LCMT2O60294 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
LCMT2O60294 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
LCMT2O60294 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC21.36■■□□□ 1.01
LCMT2O60294 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
LCMT2O60294 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
LCMT2O60294 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
LCMT2O60294 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
LCMT2O60294 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
LCMT2O60294 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
LCMT2O60294 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
LCMT2O60294 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
LCMT2O60294 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
LCMT2O60294 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC21.35■■□□□ 1.01
LCMT2O60294 GTSE1-AS1-202ENST00000623117 1518 ntBASIC21.34■■□□□ 1.01
LCMT2O60294 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC21.34■■□□□ 1.01
LCMT2O60294 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC21.34■■□□□ 1.01
LCMT2O60294 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
LCMT2O60294 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
LCMT2O60294 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC21.34■■□□□ 1.01
LCMT2O60294 ME2-208ENST00000638937 2471 ntTSL 5 BASIC21.34■■□□□ 1.01
LCMT2O60294 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
LCMT2O60294 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC21.34■■□□□ 1.01
LCMT2O60294 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC21.33■■□□□ 1.01
LCMT2O60294 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC21.33■■□□□ 1.01
LCMT2O60294 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
LCMT2O60294 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
LCMT2O60294 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
LCMT2O60294 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC21.33■■□□□ 1.01
LCMT2O60294 AC009086.3-201ENST00000623486 1008 ntBASIC21.33■■□□□ 1.01
LCMT2O60294 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
LCMT2O60294 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC21.33■■□□□ 1.01
LCMT2O60294 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
LCMT2O60294 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC21.33■■□□□ 1
LCMT2O60294 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC21.33■■□□□ 1
LCMT2O60294 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC21.32■■□□□ 1
LCMT2O60294 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
LCMT2O60294 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC21.32■■□□□ 1
LCMT2O60294 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC21.32■■□□□ 1
LCMT2O60294 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
LCMT2O60294 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC21.32■■□□□ 1
LCMT2O60294 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC21.32■■□□□ 1
LCMT2O60294 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
LCMT2O60294 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
LCMT2O60294 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC21.32■■□□□ 1
LCMT2O60294 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC21.31■■□□□ 1
LCMT2O60294 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC21.31■■□□□ 1
LCMT2O60294 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC21.31■■□□□ 1
LCMT2O60294 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC21.31■■□□□ 1
LCMT2O60294 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC21.31■■□□□ 1
LCMT2O60294 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC21.31■■□□□ 1
LCMT2O60294 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
LCMT2O60294 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
LCMT2O60294 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC21.31■■□□□ 1
LCMT2O60294 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
LCMT2O60294 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC21.3■■□□□ 1
LCMT2O60294 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
LCMT2O60294 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC21.3■■□□□ 1
LCMT2O60294 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC21.3■■□□□ 1
LCMT2O60294 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC21.3■■□□□ 1
LCMT2O60294 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
LCMT2O60294 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
LCMT2O60294 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
LCMT2O60294 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
LCMT2O60294 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms