Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SSX4O60224 AC021242.3-201ENST00000607598 1377 ntBASIC20.08■□□□□ 0.81
SSX4O60224 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SSX4O60224 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SSX4O60224 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SSX4O60224 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
SSX4O60224 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC20.08■□□□□ 0.81
SSX4O60224 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
SSX4O60224 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC20.08■□□□□ 0.8
SSX4O60224 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
SSX4O60224 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC20.08■□□□□ 0.8
SSX4O60224 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SSX4O60224 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
SSX4O60224 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SSX4O60224 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC20.07■□□□□ 0.8
SSX4O60224 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
SSX4O60224 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SSX4O60224 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SSX4O60224 PEMT-206ENST00000435340 960 ntTSL 5 BASIC20.07■□□□□ 0.8
SSX4O60224 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
SSX4O60224 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC20.07■□□□□ 0.8
SSX4O60224 ECEL1P1-201ENST00000373592 1742 ntBASIC20.07■□□□□ 0.8
SSX4O60224 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SSX4O60224 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
SSX4O60224 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SSX4O60224 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
SSX4O60224 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC20.06■□□□□ 0.8
SSX4O60224 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC20.06■□□□□ 0.8
SSX4O60224 LSM7-203ENST00000585409 512 ntTSL 2 BASIC20.06■□□□□ 0.8
SSX4O60224 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
SSX4O60224 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
SSX4O60224 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
SSX4O60224 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC20.05■□□□□ 0.8
SSX4O60224 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SSX4O60224 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
SSX4O60224 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SSX4O60224 MIR4281-201ENST00000580852 62 ntBASIC20.05■□□□□ 0.8
SSX4O60224 AC092028.1-203ENST00000608262 953 ntBASIC20.05■□□□□ 0.8
SSX4O60224 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
SSX4O60224 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SSX4O60224 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SSX4O60224 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SSX4O60224 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
SSX4O60224 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC20.04■□□□□ 0.8
SSX4O60224 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC20.04■□□□□ 0.8
SSX4O60224 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC20.04■□□□□ 0.8
SSX4O60224 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
SSX4O60224 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC20.04■□□□□ 0.8
SSX4O60224 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
SSX4O60224 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
SSX4O60224 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
SSX4O60224 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SSX4O60224 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC20.04■□□□□ 0.8
SSX4O60224 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
SSX4O60224 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SSX4O60224 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SSX4O60224 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
SSX4O60224 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SSX4O60224 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
SSX4O60224 MYB-221ENST00000527615 2381 ntTSL 5 BASIC20.03■□□□□ 0.8
SSX4O60224 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
SSX4O60224 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SSX4O60224 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC20.03■□□□□ 0.8
SSX4O60224 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SSX4O60224 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
SSX4O60224 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
SSX4O60224 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC20.03■□□□□ 0.8
SSX4O60224 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC20.03■□□□□ 0.8
SSX4O60224 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC20.03■□□□□ 0.8
SSX4O60224 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC20.03■□□□□ 0.8
SSX4O60224 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SSX4O60224 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SSX4O60224 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SSX4O60224 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
SSX4O60224 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
SSX4O60224 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC20.03■□□□□ 0.8
SSX4O60224 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SSX4O60224 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SSX4O60224 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SSX4O60224 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC20.02■□□□□ 0.8
SSX4O60224 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
SSX4O60224 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
SSX4O60224 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
SSX4O60224 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
SSX4O60224 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC20.02■□□□□ 0.79
SSX4O60224 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SSX4O60224 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
SSX4O60224 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SSX4O60224 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC20.01■□□□□ 0.79
SSX4O60224 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SSX4O60224 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC20.01■□□□□ 0.79
SSX4O60224 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SSX4O60224 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SSX4O60224 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC20.01■□□□□ 0.79
SSX4O60224 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SSX4O60224 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SSX4O60224 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC20■□□□□ 0.79
SSX4O60224 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC20■□□□□ 0.79
SSX4O60224 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
SSX4O60224 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 14.4 ms