Protein–RNA interactions for Protein: O43759

SYNGR1, Synaptogyrin-1, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR1O43759 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
SYNGR1O43759 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC18.96■□□□□ 0.63
SYNGR1O43759 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SYNGR1O43759 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC18.96■□□□□ 0.63
SYNGR1O43759 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SYNGR1O43759 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SYNGR1O43759 TFPT-201ENST00000391757 774 ntTSL 5 BASIC18.96■□□□□ 0.63
SYNGR1O43759 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
SYNGR1O43759 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SYNGR1O43759 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SYNGR1O43759 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
SYNGR1O43759 COMT-203ENST00000403184 2217 ntTSL 2 BASIC18.96■□□□□ 0.63
SYNGR1O43759 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
SYNGR1O43759 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC18.95■□□□□ 0.62
SYNGR1O43759 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SYNGR1O43759 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC18.95■□□□□ 0.62
SYNGR1O43759 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC18.95■□□□□ 0.62
SYNGR1O43759 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
SYNGR1O43759 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
SYNGR1O43759 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC18.94■□□□□ 0.62
SYNGR1O43759 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SYNGR1O43759 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SYNGR1O43759 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SYNGR1O43759 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SYNGR1O43759 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC18.94■□□□□ 0.62
SYNGR1O43759 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
SYNGR1O43759 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
SYNGR1O43759 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
SYNGR1O43759 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SYNGR1O43759 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SYNGR1O43759 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC18.94■□□□□ 0.62
SYNGR1O43759 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SYNGR1O43759 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SYNGR1O43759 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC18.93■□□□□ 0.62
SYNGR1O43759 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
SYNGR1O43759 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SYNGR1O43759 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SYNGR1O43759 ASB1-202ENST00000409297 878 ntTSL 5 BASIC18.93■□□□□ 0.62
SYNGR1O43759 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC18.93■□□□□ 0.62
SYNGR1O43759 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SYNGR1O43759 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC18.93■□□□□ 0.62
SYNGR1O43759 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
SYNGR1O43759 AC009102.2-201ENST00000606772 1639 ntBASIC18.92■□□□□ 0.62
SYNGR1O43759 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SYNGR1O43759 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
SYNGR1O43759 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SYNGR1O43759 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC18.92■□□□□ 0.62
SYNGR1O43759 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SYNGR1O43759 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
SYNGR1O43759 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
SYNGR1O43759 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SYNGR1O43759 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
SYNGR1O43759 GCA-201ENST00000233612 1694 ntTSL 2 BASIC18.92■□□□□ 0.62
SYNGR1O43759 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SYNGR1O43759 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC18.91■□□□□ 0.62
SYNGR1O43759 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SYNGR1O43759 AC233723.2-201ENST00000623798 2106 ntBASIC18.91■□□□□ 0.62
SYNGR1O43759 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC18.91■□□□□ 0.62
SYNGR1O43759 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SYNGR1O43759 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC18.91■□□□□ 0.62
SYNGR1O43759 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC18.91■□□□□ 0.62
SYNGR1O43759 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC18.91■□□□□ 0.62
SYNGR1O43759 NKILA-201ENST00000613231 537 ntTSL 4 BASIC18.91■□□□□ 0.62
SYNGR1O43759 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SYNGR1O43759 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
SYNGR1O43759 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SYNGR1O43759 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
SYNGR1O43759 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SYNGR1O43759 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SYNGR1O43759 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SYNGR1O43759 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
SYNGR1O43759 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
SYNGR1O43759 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
SYNGR1O43759 GUSBP5-201ENST00000418136 578 ntBASIC18.9■□□□□ 0.62
SYNGR1O43759 KRT16P3-201ENST00000439127 1283 ntBASIC18.9■□□□□ 0.62
SYNGR1O43759 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC18.9■□□□□ 0.62
SYNGR1O43759 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC18.9■□□□□ 0.62
SYNGR1O43759 MIR6724-1-201ENST00000616420 92 ntBASIC18.9■□□□□ 0.62
SYNGR1O43759 MIR6724-2-201ENST00000616483 92 ntBASIC18.9■□□□□ 0.62
SYNGR1O43759 MIR6724-4-201ENST00000617390 92 ntBASIC18.9■□□□□ 0.62
SYNGR1O43759 MIR6724-3-201ENST00000622482 92 ntBASIC18.9■□□□□ 0.62
SYNGR1O43759 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
SYNGR1O43759 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SYNGR1O43759 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC18.9■□□□□ 0.62
SYNGR1O43759 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
SYNGR1O43759 TERT-206ENST00000508104 2486 ntTSL 5 BASIC18.9■□□□□ 0.62
SYNGR1O43759 LINC01529-204ENST00000636474 1715 ntBASIC18.89■□□□□ 0.61
SYNGR1O43759 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC18.89■□□□□ 0.61
SYNGR1O43759 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC18.89■□□□□ 0.61
SYNGR1O43759 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SYNGR1O43759 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC18.89■□□□□ 0.61
SYNGR1O43759 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC18.89■□□□□ 0.61
SYNGR1O43759 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC18.89■□□□□ 0.61
SYNGR1O43759 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC18.89■□□□□ 0.61
SYNGR1O43759 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
SYNGR1O43759 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SYNGR1O43759 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SYNGR1O43759 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SYNGR1O43759 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SYNGR1O43759 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms