Protein–RNA interactions for Protein: O43567

RNF13, E3 ubiquitin-protein ligase RNF13, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13O43567 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
RNF13O43567 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC20.25■□□□□ 0.83
RNF13O43567 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC20.25■□□□□ 0.83
RNF13O43567 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
RNF13O43567 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC20.25■□□□□ 0.83
RNF13O43567 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RNF13O43567 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
RNF13O43567 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
RNF13O43567 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RNF13O43567 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RNF13O43567 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RNF13O43567 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
RNF13O43567 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
RNF13O43567 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC20.24■□□□□ 0.83
RNF13O43567 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
RNF13O43567 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
RNF13O43567 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC20.24■□□□□ 0.83
RNF13O43567 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC20.24■□□□□ 0.83
RNF13O43567 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
RNF13O43567 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
RNF13O43567 Z92544.1-202ENST00000571933 1220 ntBASIC20.24■□□□□ 0.83
RNF13O43567 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
RNF13O43567 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
RNF13O43567 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
RNF13O43567 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
RNF13O43567 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
RNF13O43567 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
RNF13O43567 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RNF13O43567 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC20.23■□□□□ 0.83
RNF13O43567 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RNF13O43567 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
RNF13O43567 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
RNF13O43567 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RNF13O43567 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RNF13O43567 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RNF13O43567 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RNF13O43567 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC20.23■□□□□ 0.83
RNF13O43567 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC20.23■□□□□ 0.83
RNF13O43567 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
RNF13O43567 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC20.23■□□□□ 0.83
RNF13O43567 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RNF13O43567 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
RNF13O43567 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RNF13O43567 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
RNF13O43567 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC20.23■□□□□ 0.83
RNF13O43567 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RNF13O43567 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
RNF13O43567 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC20.22■□□□□ 0.83
RNF13O43567 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
RNF13O43567 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RNF13O43567 LINC00526-201ENST00000581067 1875 ntBASIC20.22■□□□□ 0.83
RNF13O43567 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RNF13O43567 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC20.22■□□□□ 0.83
RNF13O43567 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RNF13O43567 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
RNF13O43567 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
RNF13O43567 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC20.21■□□□□ 0.83
RNF13O43567 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC20.21■□□□□ 0.83
RNF13O43567 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RNF13O43567 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
RNF13O43567 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RNF13O43567 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC20.21■□□□□ 0.83
RNF13O43567 AC239859.2-201ENST00000444165 318 ntBASIC20.21■□□□□ 0.83
RNF13O43567 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
RNF13O43567 MIR4787-201ENST00000607364 84 ntBASIC20.21■□□□□ 0.83
RNF13O43567 AC092028.1-203ENST00000608262 953 ntBASIC20.21■□□□□ 0.83
RNF13O43567 MIR6722-201ENST00000617286 78 ntBASIC20.21■□□□□ 0.83
RNF13O43567 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC20.21■□□□□ 0.83
RNF13O43567 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RNF13O43567 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
RNF13O43567 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RNF13O43567 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC20.2■□□□□ 0.82
RNF13O43567 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC20.2■□□□□ 0.82
RNF13O43567 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
RNF13O43567 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RNF13O43567 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RNF13O43567 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RNF13O43567 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC20.2■□□□□ 0.82
RNF13O43567 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC20.2■□□□□ 0.82
RNF13O43567 AC009299.2-201ENST00000482477 511 ntBASIC20.2■□□□□ 0.82
RNF13O43567 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
RNF13O43567 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC20.2■□□□□ 0.82
RNF13O43567 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC20.2■□□□□ 0.82
RNF13O43567 GUSBP5-202ENST00000510805 1989 ntBASIC20.2■□□□□ 0.82
RNF13O43567 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RNF13O43567 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC20.2■□□□□ 0.82
RNF13O43567 AC005703.6-201ENST00000623265 1329 ntBASIC20.2■□□□□ 0.82
RNF13O43567 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RNF13O43567 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RNF13O43567 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RNF13O43567 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
RNF13O43567 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC20.19■□□□□ 0.82
RNF13O43567 AC079630.1-202ENST00000618127 1840 ntBASIC20.19■□□□□ 0.82
RNF13O43567 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
RNF13O43567 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
RNF13O43567 AL451085.2-201ENST00000605085 799 ntBASIC20.19■□□□□ 0.82
RNF13O43567 TERT-206ENST00000508104 2486 ntTSL 5 BASIC20.19■□□□□ 0.82
RNF13O43567 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
RNF13O43567 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RNF13O43567 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms