| WNT9A | O14904 | ZNF846-212 | ENST00000592859 | 1206 nt | TSL 2 BASIC | 22.43 | ■■□□□ 1.18 | | |
| WNT9A | O14904 | HRH3-203 | ENST00000611492 | 900 nt | TSL 1 (best) BASIC | 22.43 | ■■□□□ 1.18 | | |
| WNT9A | O14904 | FZD9-201 | ENST00000344575 | 2338 nt | APPRIS P1 BASIC | 22.43 | ■■□□□ 1.18 | | |
| WNT9A | O14904 | LRRC34-206 | ENST00000522526 | 1899 nt | APPRIS P3 TSL 1 (best) BASIC | 22.43 | ■■□□□ 1.18 | | |
| WNT9A | O14904 | BCL2L12-212 | ENST00000616144 | 1854 nt | APPRIS P3 TSL 1 (best) BASIC | 22.43 | ■■□□□ 1.18 | | |
| WNT9A | O14904 | AC099805.1-201 | ENST00000523987 | 1797 nt | TSL 1 (best) BASIC | 22.43 | ■■□□□ 1.18 | | |
| WNT9A | O14904 | SAMD8-202 | ENST00000372690 | 1654 nt | TSL 1 (best) BASIC | 22.42 | ■■□□□ 1.18 | | |
| WNT9A | O14904 | NMI-201 | ENST00000243346 | 1623 nt | APPRIS P1 TSL 1 (best) BASIC | 22.42 | ■■□□□ 1.18 | | |
| WNT9A | O14904 | BSPRY-201 | ENST00000374183 | 2339 nt | APPRIS P1 TSL 1 (best) BASIC | 22.42 | ■■□□□ 1.18 | | |
| WNT9A | O14904 | TMEM44-202 | ENST00000347147 | 2245 nt | APPRIS P1 TSL 1 (best) BASIC | 22.42 | ■■□□□ 1.18 | | |
| WNT9A | O14904 | EML2-209 | ENST00000587152 | 2763 nt | APPRIS ALT2 TSL 2 BASIC | 22.42 | ■■□□□ 1.18 | | |
| WNT9A | O14904 | GALNT12-201 | ENST00000375011 | 2735 nt | APPRIS P1 TSL 1 (best) BASIC | 22.42 | ■■□□□ 1.18 | | |
| WNT9A | O14904 | ZDHHC1-201 | ENST00000348579 | 2047 nt | APPRIS P2 TSL 1 (best) BASIC | 22.42 | ■■□□□ 1.18 | | |
| WNT9A | O14904 | TMEM150C-201 | ENST00000449862 | 1990 nt | APPRIS P1 TSL 1 (best) BASIC | 22.42 | ■■□□□ 1.18 | | |
| WNT9A | O14904 | KLRG2-202 | ENST00000393039 | 1148 nt | TSL 5 BASIC | 22.42 | ■■□□□ 1.18 | | |
| WNT9A | O14904 | MIR5787-201 | ENST00000611784 | 55 nt | BASIC | 22.42 | ■■□□□ 1.18 | | |
| WNT9A | O14904 | HAR1A-201 | ENST00000433161 | 1882 nt | TSL 1 (best) BASIC | 22.42 | ■■□□□ 1.18 | | |
| WNT9A | O14904 | ARMC10-202 | ENST00000323716 | 2635 nt | TSL 1 (best) BASIC | 22.42 | ■■□□□ 1.18 | | |
| WNT9A | O14904 | ARF1-213 | ENST00000540651 | 1972 nt | APPRIS P1 TSL 2 BASIC | 22.41 | ■■□□□ 1.18 | | |
| WNT9A | O14904 | RNPEP-202 | ENST00000367286 | 2282 nt | TSL 5 BASIC | 22.41 | ■■□□□ 1.18 | | |
| WNT9A | O14904 | AARD-201 | ENST00000378279 | 2299 nt | APPRIS P1 TSL 1 (best) BASIC | 22.41 | ■■□□□ 1.18 | | |
| WNT9A | O14904 | ATP5A1-220 | ENST00000593152 | 2258 nt | TSL 2 BASIC | 22.41 | ■■□□□ 1.18 | | |
| WNT9A | O14904 | ATP5G2-201 | ENST00000338662 | 1792 nt | TSL 2 BASIC | 22.41 | ■■□□□ 1.18 | | |
| WNT9A | O14904 | FUS-210 | ENST00000568685 | 1785 nt | APPRIS ALT2 TSL 5 BASIC | 22.41 | ■■□□□ 1.18 | | |
| WNT9A | O14904 | MYDGF-203 | ENST00000599630 | 713 nt | TSL 2 BASIC | 22.41 | ■■□□□ 1.18 | | |
| WNT9A | O14904 | AC087623.3-201 | ENST00000607047 | 1098 nt | BASIC | 22.41 | ■■□□□ 1.18 | | |
| WNT9A | O14904 | MIR6821-201 | ENST00000617625 | 74 nt | BASIC | 22.41 | ■■□□□ 1.18 | | |
| WNT9A | O14904 | GTSE1-AS1-202 | ENST00000623117 | 1518 nt | BASIC | 22.41 | ■■□□□ 1.18 | | |
| WNT9A | O14904 | AGTR1-203 | ENST00000404754 | 2252 nt | APPRIS P1 TSL 1 (best) BASIC | 22.41 | ■■□□□ 1.18 | | |
| WNT9A | O14904 | ST3GAL4-213 | ENST00000530591 | 1459 nt | APPRIS P3 TSL 1 (best) BASIC | 22.41 | ■■□□□ 1.18 | | |
| WNT9A | O14904 | CYP2A13-201 | ENST00000330436 | 1739 nt | APPRIS P1 TSL 1 (best) BASIC | 22.4 | ■■□□□ 1.18 | | |
| WNT9A | O14904 | LGALS9B-202 | ENST00000423676 | 1713 nt | APPRIS ALT2 TSL 1 (best) BASIC | 22.4 | ■■□□□ 1.18 | | |
| WNT9A | O14904 | SYNGR3-202 | ENST00000562045 | 1743 nt | TSL 2 BASIC | 22.4 | ■■□□□ 1.18 | | |
| WNT9A | O14904 | LRRC75A-203 | ENST00000470794 | 1390 nt | APPRIS ALT2 TSL 1 (best) BASIC | 22.4 | ■■□□□ 1.18 | | |
| WNT9A | O14904 | SLC25A29-201 | ENST00000359232 | 2385 nt | APPRIS P1 TSL 1 (best) BASIC | 22.4 | ■■□□□ 1.18 | | |
| WNT9A | O14904 | METTL23-201 | ENST00000341249 | 1155 nt | APPRIS P1 TSL 1 (best) BASIC | 22.4 | ■■□□□ 1.18 | | |
| WNT9A | O14904 | ATP5C1-202 | ENST00000356708 | 1163 nt | APPRIS ALT1 TSL 1 (best) BASIC | 22.4 | ■■□□□ 1.18 | | |
| WNT9A | O14904 | FAM222B-208 | ENST00000581381 | 556 nt | TSL 4 BASIC | 22.4 | ■■□□□ 1.18 | | |
| WNT9A | O14904 | MAGI2-208 | ENST00000522391 | 4878 nt | APPRIS ALT2 TSL 5 BASIC | 22.4 | ■■□□□ 1.18 | | |
| WNT9A | O14904 | AL353743.1-201 | ENST00000637846 | 1769 nt | TSL 5 BASIC | 22.4 | ■■□□□ 1.18 | | |
| WNT9A | O14904 | FXYD3-201 | ENST00000344013 | 1404 nt | TSL 5 BASIC | 22.4 | ■■□□□ 1.18 | | |
| WNT9A | O14904 | SESN3-202 | ENST00000416495 | 1408 nt | TSL 1 (best) BASIC | 22.4 | ■■□□□ 1.18 | | |
| WNT9A | O14904 | PPAN-201 | ENST00000253107 | 1657 nt | APPRIS P1 TSL 1 (best) BASIC | 22.39 | ■■□□□ 1.18 | | |
| WNT9A | O14904 | LTK-203 | ENST00000453182 | 2412 nt | TSL 2 BASIC | 22.39 | ■■□□□ 1.18 | | |
| WNT9A | O14904 | TBC1D22A-202 | ENST00000355704 | 1886 nt | TSL 1 (best) BASIC | 22.39 | ■■□□□ 1.18 | | |
| WNT9A | O14904 | ENTPD4-201 | ENST00000356206 | 2097 nt | TSL 1 (best) BASIC | 22.39 | ■■□□□ 1.17 | | |
| WNT9A | O14904 | ENTPD4-203 | ENST00000417069 | 2063 nt | APPRIS P1 TSL 1 (best) BASIC | 22.39 | ■■□□□ 1.17 | | |
| WNT9A | O14904 | PCMT1-201 | ENST00000367378 | 1293 nt | APPRIS P3 TSL 1 (best) BASIC | 22.39 | ■■□□□ 1.17 | | |
| WNT9A | O14904 | CDC37L1-202 | ENST00000381858 | 1244 nt | TSL 5 BASIC | 22.39 | ■■□□□ 1.17 | | |
| WNT9A | O14904 | NGEF-203 | ENST00000409079 | 1022 nt | TSL 1 (best) BASIC | 22.39 | ■■□□□ 1.17 | | |
| WNT9A | O14904 | RHOF-204 | ENST00000537265 | 699 nt | TSL 2 BASIC | 22.39 | ■■□□□ 1.17 | | |
| WNT9A | O14904 | pRNA.6-201 | ENST00000610482 | 90 nt | BASIC | 22.39 | ■■□□□ 1.17 | | |
| WNT9A | O14904 | pRNA.5-201 | ENST00000612139 | 90 nt | BASIC | 22.39 | ■■□□□ 1.17 | | |
| WNT9A | O14904 | pRNA.11-201 | ENST00000618423 | 90 nt | BASIC | 22.39 | ■■□□□ 1.17 | | |
| WNT9A | O14904 | pRNA.13-201 | ENST00000619112 | 90 nt | BASIC | 22.39 | ■■□□□ 1.17 | | |
| WNT9A | O14904 | PLEKHB1-201 | ENST00000227214 | 2016 nt | APPRIS ALT1 TSL 1 (best) BASIC | 22.38 | ■■□□□ 1.17 | | |
| WNT9A | O14904 | ARIH2OS-201 | ENST00000408959 | 1598 nt | APPRIS P1 BASIC | 22.38 | ■■□□□ 1.17 | | |
| WNT9A | O14904 | BIN1-205 | ENST00000351659 | 2365 nt | TSL 1 (best) BASIC | 22.38 | ■■□□□ 1.17 | | |
| WNT9A | O14904 | IRS3P-201 | ENST00000223076 | 1006 nt | BASIC | 22.38 | ■■□□□ 1.17 | | |
| WNT9A | O14904 | ASB1-202 | ENST00000409297 | 878 nt | TSL 5 BASIC | 22.38 | ■■□□□ 1.17 | | |
| WNT9A | O14904 | AC097381.1-201 | ENST00000429019 | 1296 nt | BASIC | 22.38 | ■■□□□ 1.17 | | |
| WNT9A | O14904 | AC007009.1-201 | ENST00000458624 | 429 nt | TSL 2 BASIC | 22.38 | ■■□□□ 1.17 | | |
| WNT9A | O14904 | OIP5-AS1-208 | ENST00000560706 | 473 nt | TSL 5 BASIC | 22.38 | ■■□□□ 1.17 | | |
| WNT9A | O14904 | HERC2P4-206 | ENST00000568097 | 1062 nt | TSL 5 BASIC | 22.38 | ■■□□□ 1.17 | | |
| WNT9A | O14904 | AC233992.3-201 | ENST00000607491 | 485 nt | BASIC | 22.38 | ■■□□□ 1.17 | | |
| WNT9A | O14904 | ANKRD20A6P-201 | ENST00000618763 | 204 nt | BASIC | 22.38 | ■■□□□ 1.17 | | |
| WNT9A | O14904 | TTC39A-203 | ENST00000371747 | 1876 nt | TSL 2 BASIC | 22.38 | ■■□□□ 1.17 | | |
| WNT9A | O14904 | ARL6IP4-201 | ENST00000315580 | 1644 nt | APPRIS P3 TSL 1 (best) BASIC | 22.38 | ■■□□□ 1.17 | | |
| WNT9A | O14904 | R3HDM4-201 | ENST00000361574 | 1815 nt | APPRIS P1 TSL 1 (best) BASIC | 22.38 | ■■□□□ 1.17 | | |
| WNT9A | O14904 | METTL9-202 | ENST00000396014 | 1817 nt | APPRIS ALT1 TSL 1 (best) BASIC | 22.38 | ■■□□□ 1.17 | | |
| WNT9A | O14904 | C1QL2-201 | ENST00000272520 | 2043 nt | APPRIS P1 TSL 1 (best) BASIC | 22.38 | ■■□□□ 1.17 | | |
| WNT9A | O14904 | NR2F6-201 | ENST00000291442 | 2404 nt | APPRIS P1 TSL 1 (best) BASIC | 22.38 | ■■□□□ 1.17 | | |
| WNT9A | O14904 | DYRK3-203 | ENST00000367109 | 2163 nt | APPRIS P1 TSL 1 (best) BASIC | 22.38 | ■■□□□ 1.17 | | |
| WNT9A | O14904 | TMED4-205 | ENST00000481238 | 1755 nt | TSL 1 (best) BASIC | 22.38 | ■■□□□ 1.17 | | |
| WNT9A | O14904 | DHH-201 | ENST00000266991 | 1936 nt | APPRIS P1 TSL 1 (best) BASIC | 22.37 | ■■□□□ 1.17 | | |
| WNT9A | O14904 | DALRD3-206 | ENST00000441576 | 1706 nt | TSL 1 (best) BASIC | 22.37 | ■■□□□ 1.17 | | |
| WNT9A | O14904 | MADCAM1-205 | ENST00000613880 | 1509 nt | APPRIS ALT2 TSL 5 BASIC | 22.37 | ■■□□□ 1.17 | | |
| WNT9A | O14904 | HOXD9-201 | ENST00000249499 | 1870 nt | APPRIS P1 TSL 1 (best) BASIC | 22.37 | ■■□□□ 1.17 | | |
| WNT9A | O14904 | TRIR-201 | ENST00000242784 | 970 nt | APPRIS P1 TSL 1 (best) BASIC | 22.37 | ■■□□□ 1.17 | | |
| WNT9A | O14904 | AIPL1-206 | ENST00000571740 | 1202 nt | APPRIS ALT2 TSL 1 (best) BASIC | 22.37 | ■■□□□ 1.17 | | |
| WNT9A | O14904 | KCNIP2-206 | ENST00000356640 | 1989 nt | TSL 1 (best) BASIC | 22.37 | ■■□□□ 1.17 | | |
| WNT9A | O14904 | ZC3H14-223 | ENST00000557607 | 1983 nt | TSL 5 BASIC | 22.37 | ■■□□□ 1.17 | | |
| WNT9A | O14904 | ST7L-221 | ENST00000490067 | 1780 nt | TSL 1 (best) BASIC | 22.37 | ■■□□□ 1.17 | | |
| WNT9A | O14904 | IRF3-201 | ENST00000309877 | 1691 nt | APPRIS P1 TSL 1 (best) BASIC | 22.36 | ■■□□□ 1.17 | | |
| WNT9A | O14904 | ARPC5L-201 | ENST00000259477 | 1325 nt | APPRIS P1 TSL 1 (best) BASIC | 22.36 | ■■□□□ 1.17 | | |
| WNT9A | O14904 | HOXD4-201 | ENST00000306324 | 1464 nt | APPRIS P1 TSL 1 (best) BASIC | 22.36 | ■■□□□ 1.17 | | |
| WNT9A | O14904 | TTC34-202 | ENST00000637179 | 1775 nt | APPRIS P2 TSL 5 BASIC | 22.36 | ■■□□□ 1.17 | | |
| WNT9A | O14904 | CYC1-201 | ENST00000318911 | 1240 nt | APPRIS P1 TSL 1 (best) BASIC | 22.36 | ■■□□□ 1.17 | | |
| WNT9A | O14904 | JTB-203 | ENST00000368589 | 1216 nt | TSL 2 BASIC | 22.36 | ■■□□□ 1.17 | | |
| WNT9A | O14904 | BX842568.3-201 | ENST00000418104 | 571 nt | BASIC | 22.36 | ■■□□□ 1.17 | | |
| WNT9A | O14904 | ATP6V0B-204 | ENST00000471859 | 865 nt | TSL 5 BASIC | 22.36 | ■■□□□ 1.17 | | |
| WNT9A | O14904 | SIRT3-215 | ENST00000532956 | 1235 nt | TSL 2 BASIC | 22.36 | ■■□□□ 1.17 | | |
| WNT9A | O14904 | SLC39A3-203 | ENST00000545664 | 1219 nt | TSL 2 BASIC | 22.36 | ■■□□□ 1.17 | | |
| WNT9A | O14904 | ORAI3-202 | ENST00000562699 | 628 nt | TSL 2 BASIC | 22.36 | ■■□□□ 1.17 | | |
| WNT9A | O14904 | DIRAS1-202 | ENST00000585334 | 774 nt | APPRIS P1 BASIC | 22.36 | ■■□□□ 1.17 | | |
| WNT9A | O14904 | VSTM4-201 | ENST00000298454 | 2170 nt | APPRIS P3 TSL 2 BASIC | 22.36 | ■■□□□ 1.17 | | |
| WNT9A | O14904 | SPRED3-204 | ENST00000587013 | 1539 nt | TSL 5 BASIC | 22.36 | ■■□□□ 1.17 | | |
| WNT9A | O14904 | GAS2L1-201 | ENST00000406549 | 1803 nt | TSL 1 (best) BASIC | 22.36 | ■■□□□ 1.17 | | |
| WNT9A | O14904 | C5orf58-204 | ENST00000521850 | 2113 nt | APPRIS ALT2 TSL 1 (best) BASIC | 22.36 | ■■□□□ 1.17 | | |
| WNT9A | O14904 | THOC6-202 | ENST00000326266 | 1419 nt | APPRIS P1 TSL 1 (best) BASIC | 22.35 | ■■□□□ 1.17 | | |