Protein–RNA interactions for Protein: O00501

CLDN5, Claudin-5, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN5O00501 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC23.64■■□□□ 1.38
CLDN5O00501 ANOS2P-203ENST00000472227 1816 ntBASIC23.64■■□□□ 1.38
CLDN5O00501 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC23.64■■□□□ 1.37
CLDN5O00501 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC23.64■■□□□ 1.37
CLDN5O00501 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC23.64■■□□□ 1.37
CLDN5O00501 AL138724.1-201ENST00000606771 1088 ntBASIC23.64■■□□□ 1.37
CLDN5O00501 AC011298.3-201ENST00000615796 283 ntBASIC23.64■■□□□ 1.37
CLDN5O00501 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
CLDN5O00501 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.37
CLDN5O00501 THRA-202ENST00000394121 2260 ntTSL 2 BASIC23.64■■□□□ 1.37
CLDN5O00501 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
CLDN5O00501 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
CLDN5O00501 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC23.63■■□□□ 1.37
CLDN5O00501 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC23.63■■□□□ 1.37
CLDN5O00501 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
CLDN5O00501 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC23.63■■□□□ 1.37
CLDN5O00501 GRAMD4P4-201ENST00000613563 1115 ntBASIC23.63■■□□□ 1.37
CLDN5O00501 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC23.63■■□□□ 1.37
CLDN5O00501 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
CLDN5O00501 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC23.63■■□□□ 1.37
CLDN5O00501 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
CLDN5O00501 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC23.62■■□□□ 1.37
CLDN5O00501 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
CLDN5O00501 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC23.62■■□□□ 1.37
CLDN5O00501 AL353803.4-201ENST00000565882 1934 ntBASIC23.62■■□□□ 1.37
CLDN5O00501 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC23.61■■□□□ 1.37
CLDN5O00501 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
CLDN5O00501 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC23.61■■□□□ 1.37
CLDN5O00501 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
CLDN5O00501 EDA-201ENST00000338901 1233 ntBASIC23.61■■□□□ 1.37
CLDN5O00501 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
CLDN5O00501 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
CLDN5O00501 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC23.61■■□□□ 1.37
CLDN5O00501 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC23.61■■□□□ 1.37
CLDN5O00501 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
CLDN5O00501 SUDS3P1-201ENST00000505831 966 ntBASIC23.61■■□□□ 1.37
CLDN5O00501 AL355001.2-201ENST00000620617 1191 ntBASIC23.61■■□□□ 1.37
CLDN5O00501 AC136469.2-201ENST00000623944 1028 ntBASIC23.61■■□□□ 1.37
CLDN5O00501 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC23.61■■□□□ 1.37
CLDN5O00501 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC23.61■■□□□ 1.37
CLDN5O00501 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC23.6■■□□□ 1.37
CLDN5O00501 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC23.6■■□□□ 1.37
CLDN5O00501 AC142381.2-201ENST00000566120 298 ntBASIC23.6■■□□□ 1.37
CLDN5O00501 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC23.6■■□□□ 1.37
CLDN5O00501 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC23.6■■□□□ 1.37
CLDN5O00501 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC23.6■■□□□ 1.37
CLDN5O00501 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC23.6■■□□□ 1.37
CLDN5O00501 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
CLDN5O00501 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
CLDN5O00501 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC23.59■■□□□ 1.37
CLDN5O00501 AP001330.3-201ENST00000520123 633 ntBASIC23.59■■□□□ 1.37
CLDN5O00501 AF213884.3-201ENST00000563833 479 ntBASIC23.59■■□□□ 1.37
CLDN5O00501 AL499627.2-201ENST00000606283 725 ntBASIC23.59■■□□□ 1.37
CLDN5O00501 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC23.59■■□□□ 1.37
CLDN5O00501 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
CLDN5O00501 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
CLDN5O00501 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
CLDN5O00501 AC133637.1-201ENST00000624115 1537 ntBASIC23.59■■□□□ 1.37
CLDN5O00501 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
CLDN5O00501 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC23.58■■□□□ 1.37
CLDN5O00501 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC23.58■■□□□ 1.37
CLDN5O00501 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
CLDN5O00501 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC23.58■■□□□ 1.37
CLDN5O00501 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC23.58■■□□□ 1.37
CLDN5O00501 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC23.58■■□□□ 1.37
CLDN5O00501 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC23.58■■□□□ 1.37
CLDN5O00501 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC23.58■■□□□ 1.37
CLDN5O00501 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC23.58■■□□□ 1.37
CLDN5O00501 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC23.58■■□□□ 1.37
CLDN5O00501 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
CLDN5O00501 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
CLDN5O00501 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC23.57■■□□□ 1.36
CLDN5O00501 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
CLDN5O00501 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC23.57■■□□□ 1.36
CLDN5O00501 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
CLDN5O00501 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC23.57■■□□□ 1.36
CLDN5O00501 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
CLDN5O00501 MAG-206ENST00000597035 542 ntTSL 4 BASIC23.57■■□□□ 1.36
CLDN5O00501 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC23.57■■□□□ 1.36
CLDN5O00501 AL136967.2-201ENST00000623968 743 ntBASIC23.57■■□□□ 1.36
CLDN5O00501 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
CLDN5O00501 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC23.57■■□□□ 1.36
CLDN5O00501 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
CLDN5O00501 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC23.57■■□□□ 1.36
CLDN5O00501 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
CLDN5O00501 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC23.57■■□□□ 1.36
CLDN5O00501 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
CLDN5O00501 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
CLDN5O00501 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
CLDN5O00501 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC23.56■■□□□ 1.36
CLDN5O00501 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
CLDN5O00501 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
CLDN5O00501 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC23.55■■□□□ 1.36
CLDN5O00501 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC23.55■■□□□ 1.36
CLDN5O00501 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC23.55■■□□□ 1.36
CLDN5O00501 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC23.55■■□□□ 1.36
CLDN5O00501 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC23.55■■□□□ 1.36
CLDN5O00501 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC23.55■■□□□ 1.36
CLDN5O00501 MIR939-201ENST00000401314 82 ntBASIC23.55■■□□□ 1.36
CLDN5O00501 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC23.55■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms