Protein–RNA interactions for Protein: A6NIV6

LRRIQ4, Leucine-rich repeat and IQ domain-containing protein 4, humanhuman

Predictions only

Length 560 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRIQ4A6NIV6 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
LRRIQ4A6NIV6 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
LRRIQ4A6NIV6 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC24.59■■□□□ 1.53
LRRIQ4A6NIV6 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC24.59■■□□□ 1.53
LRRIQ4A6NIV6 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC24.59■■□□□ 1.53
LRRIQ4A6NIV6 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC24.59■■□□□ 1.53
LRRIQ4A6NIV6 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
LRRIQ4A6NIV6 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
LRRIQ4A6NIV6 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC24.59■■□□□ 1.53
LRRIQ4A6NIV6 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
LRRIQ4A6NIV6 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC24.58■■□□□ 1.53
LRRIQ4A6NIV6 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC24.58■■□□□ 1.53
LRRIQ4A6NIV6 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
LRRIQ4A6NIV6 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC24.58■■□□□ 1.53
LRRIQ4A6NIV6 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC24.58■■□□□ 1.52
LRRIQ4A6NIV6 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC24.58■■□□□ 1.52
LRRIQ4A6NIV6 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC24.58■■□□□ 1.52
LRRIQ4A6NIV6 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC24.58■■□□□ 1.52
LRRIQ4A6NIV6 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC24.58■■□□□ 1.52
LRRIQ4A6NIV6 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
LRRIQ4A6NIV6 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC24.57■■□□□ 1.52
LRRIQ4A6NIV6 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
LRRIQ4A6NIV6 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC24.57■■□□□ 1.52
LRRIQ4A6NIV6 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
LRRIQ4A6NIV6 AF213884.3-201ENST00000563833 479 ntBASIC24.57■■□□□ 1.52
LRRIQ4A6NIV6 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC24.57■■□□□ 1.52
LRRIQ4A6NIV6 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC24.57■■□□□ 1.52
LRRIQ4A6NIV6 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC24.57■■□□□ 1.52
LRRIQ4A6NIV6 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC24.57■■□□□ 1.52
LRRIQ4A6NIV6 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
LRRIQ4A6NIV6 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC24.56■■□□□ 1.52
LRRIQ4A6NIV6 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC24.56■■□□□ 1.52
LRRIQ4A6NIV6 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
LRRIQ4A6NIV6 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC24.56■■□□□ 1.52
LRRIQ4A6NIV6 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
LRRIQ4A6NIV6 SUDS3P1-201ENST00000505831 966 ntBASIC24.56■■□□□ 1.52
LRRIQ4A6NIV6 AP001330.3-201ENST00000520123 633 ntBASIC24.56■■□□□ 1.52
LRRIQ4A6NIV6 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC24.56■■□□□ 1.52
LRRIQ4A6NIV6 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
LRRIQ4A6NIV6 AC133637.1-201ENST00000624115 1537 ntBASIC24.56■■□□□ 1.52
LRRIQ4A6NIV6 AL353803.4-201ENST00000565882 1934 ntBASIC24.55■■□□□ 1.52
LRRIQ4A6NIV6 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
LRRIQ4A6NIV6 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
LRRIQ4A6NIV6 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
LRRIQ4A6NIV6 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC24.55■■□□□ 1.52
LRRIQ4A6NIV6 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC24.55■■□□□ 1.52
LRRIQ4A6NIV6 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC24.55■■□□□ 1.52
LRRIQ4A6NIV6 AL499627.2-201ENST00000606283 725 ntBASIC24.55■■□□□ 1.52
LRRIQ4A6NIV6 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC24.55■■□□□ 1.52
LRRIQ4A6NIV6 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC24.55■■□□□ 1.52
LRRIQ4A6NIV6 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
LRRIQ4A6NIV6 ANOS2P-203ENST00000472227 1816 ntBASIC24.54■■□□□ 1.52
LRRIQ4A6NIV6 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC24.54■■□□□ 1.52
LRRIQ4A6NIV6 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
LRRIQ4A6NIV6 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC24.54■■□□□ 1.52
LRRIQ4A6NIV6 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC24.54■■□□□ 1.52
LRRIQ4A6NIV6 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC24.54■■□□□ 1.52
LRRIQ4A6NIV6 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC24.54■■□□□ 1.52
LRRIQ4A6NIV6 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC24.53■■□□□ 1.52
LRRIQ4A6NIV6 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
LRRIQ4A6NIV6 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC24.53■■□□□ 1.52
LRRIQ4A6NIV6 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC24.53■■□□□ 1.52
LRRIQ4A6NIV6 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC24.53■■□□□ 1.52
LRRIQ4A6NIV6 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
LRRIQ4A6NIV6 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC24.53■■□□□ 1.52
LRRIQ4A6NIV6 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
LRRIQ4A6NIV6 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
LRRIQ4A6NIV6 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC24.53■■□□□ 1.52
LRRIQ4A6NIV6 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
LRRIQ4A6NIV6 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC24.53■■□□□ 1.52
LRRIQ4A6NIV6 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
LRRIQ4A6NIV6 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC24.53■■□□□ 1.52
LRRIQ4A6NIV6 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
LRRIQ4A6NIV6 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
LRRIQ4A6NIV6 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC24.52■■□□□ 1.52
LRRIQ4A6NIV6 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
LRRIQ4A6NIV6 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC24.52■■□□□ 1.52
LRRIQ4A6NIV6 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
LRRIQ4A6NIV6 MIR939-201ENST00000401314 82 ntBASIC24.52■■□□□ 1.52
LRRIQ4A6NIV6 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC24.52■■□□□ 1.52
LRRIQ4A6NIV6 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC24.52■■□□□ 1.52
LRRIQ4A6NIV6 AC008764.7-201ENST00000593779 1081 ntBASIC24.52■■□□□ 1.52
LRRIQ4A6NIV6 AL136967.2-201ENST00000623968 743 ntBASIC24.52■■□□□ 1.52
LRRIQ4A6NIV6 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC24.52■■□□□ 1.52
LRRIQ4A6NIV6 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC24.52■■□□□ 1.52
LRRIQ4A6NIV6 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
LRRIQ4A6NIV6 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC24.52■■□□□ 1.52
LRRIQ4A6NIV6 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC24.52■■□□□ 1.52
LRRIQ4A6NIV6 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC24.52■■□□□ 1.52
LRRIQ4A6NIV6 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC24.51■■□□□ 1.51
LRRIQ4A6NIV6 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC24.51■■□□□ 1.51
LRRIQ4A6NIV6 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
LRRIQ4A6NIV6 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
LRRIQ4A6NIV6 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC24.51■■□□□ 1.51
LRRIQ4A6NIV6 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC24.51■■□□□ 1.51
LRRIQ4A6NIV6 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
LRRIQ4A6NIV6 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC24.51■■□□□ 1.51
LRRIQ4A6NIV6 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC24.5■■□□□ 1.51
LRRIQ4A6NIV6 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
LRRIQ4A6NIV6 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC24.5■■□□□ 1.51
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms