Protein–RNA interactions for Protein: A6NCK2

TRIM43B, Tripartite motif-containing protein 43B, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43BA6NCK2 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
TRIM43BA6NCK2 CROCCP5-201ENST00000436658 830 ntBASIC24.67■■□□□ 1.54
TRIM43BA6NCK2 DBI-210ENST00000542275 757 ntTSL 5 BASIC24.67■■□□□ 1.54
TRIM43BA6NCK2 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC24.67■■□□□ 1.54
TRIM43BA6NCK2 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
TRIM43BA6NCK2 ALDH1A3-203ENST00000557963 1670 ntBASIC24.66■■□□□ 1.54
TRIM43BA6NCK2 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC24.66■■□□□ 1.54
TRIM43BA6NCK2 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
TRIM43BA6NCK2 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC24.66■■□□□ 1.54
TRIM43BA6NCK2 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC24.66■■□□□ 1.54
TRIM43BA6NCK2 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
TRIM43BA6NCK2 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC24.66■■□□□ 1.54
TRIM43BA6NCK2 AL109923.1-201ENST00000618799 583 ntBASIC24.66■■□□□ 1.54
TRIM43BA6NCK2 AL161729.1-201ENST00000604104 1402 ntBASIC24.66■■□□□ 1.54
TRIM43BA6NCK2 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
TRIM43BA6NCK2 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC24.66■■□□□ 1.54
TRIM43BA6NCK2 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC24.66■■□□□ 1.54
TRIM43BA6NCK2 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC24.65■■□□□ 1.54
TRIM43BA6NCK2 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC24.65■■□□□ 1.54
TRIM43BA6NCK2 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC24.65■■□□□ 1.54
TRIM43BA6NCK2 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC24.65■■□□□ 1.54
TRIM43BA6NCK2 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC24.65■■□□□ 1.54
TRIM43BA6NCK2 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC24.65■■□□□ 1.54
TRIM43BA6NCK2 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
TRIM43BA6NCK2 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC24.65■■□□□ 1.54
TRIM43BA6NCK2 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC24.65■■□□□ 1.54
TRIM43BA6NCK2 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
TRIM43BA6NCK2 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC24.64■■□□□ 1.54
TRIM43BA6NCK2 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC24.64■■□□□ 1.54
TRIM43BA6NCK2 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC24.64■■□□□ 1.54
TRIM43BA6NCK2 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC24.64■■□□□ 1.53
TRIM43BA6NCK2 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC24.63■■□□□ 1.53
TRIM43BA6NCK2 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC24.63■■□□□ 1.53
TRIM43BA6NCK2 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC24.63■■□□□ 1.53
TRIM43BA6NCK2 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
TRIM43BA6NCK2 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
TRIM43BA6NCK2 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
TRIM43BA6NCK2 AC006970.2-201ENST00000450065 779 ntBASIC24.63■■□□□ 1.53
TRIM43BA6NCK2 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC24.63■■□□□ 1.53
TRIM43BA6NCK2 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC24.63■■□□□ 1.53
TRIM43BA6NCK2 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC24.63■■□□□ 1.53
TRIM43BA6NCK2 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC24.63■■□□□ 1.53
TRIM43BA6NCK2 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC24.63■■□□□ 1.53
TRIM43BA6NCK2 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC24.63■■□□□ 1.53
TRIM43BA6NCK2 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
TRIM43BA6NCK2 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
TRIM43BA6NCK2 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
TRIM43BA6NCK2 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
TRIM43BA6NCK2 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC24.62■■□□□ 1.53
TRIM43BA6NCK2 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
TRIM43BA6NCK2 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
TRIM43BA6NCK2 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC24.62■■□□□ 1.53
TRIM43BA6NCK2 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
TRIM43BA6NCK2 BID-214ENST00000617586 542 ntTSL 5 BASIC24.62■■□□□ 1.53
TRIM43BA6NCK2 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC24.62■■□□□ 1.53
TRIM43BA6NCK2 AP004607.4-201ENST00000530158 1459 ntBASIC24.62■■□□□ 1.53
TRIM43BA6NCK2 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC24.62■■□□□ 1.53
TRIM43BA6NCK2 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC24.62■■□□□ 1.53
TRIM43BA6NCK2 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC24.61■■□□□ 1.53
TRIM43BA6NCK2 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC24.61■■□□□ 1.53
TRIM43BA6NCK2 SHD-204ENST00000599689 1729 ntTSL 5 BASIC24.61■■□□□ 1.53
TRIM43BA6NCK2 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC24.61■■□□□ 1.53
TRIM43BA6NCK2 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
TRIM43BA6NCK2 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC24.61■■□□□ 1.53
TRIM43BA6NCK2 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC24.61■■□□□ 1.53
TRIM43BA6NCK2 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
TRIM43BA6NCK2 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC24.6■■□□□ 1.53
TRIM43BA6NCK2 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC24.6■■□□□ 1.53
TRIM43BA6NCK2 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC24.6■■□□□ 1.53
TRIM43BA6NCK2 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC24.6■■□□□ 1.53
TRIM43BA6NCK2 NCF1B-203ENST00000435988 1254 ntBASIC24.6■■□□□ 1.53
TRIM43BA6NCK2 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC24.6■■□□□ 1.53
TRIM43BA6NCK2 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC24.6■■□□□ 1.53
TRIM43BA6NCK2 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
TRIM43BA6NCK2 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC24.6■■□□□ 1.53
TRIM43BA6NCK2 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC24.6■■□□□ 1.53
TRIM43BA6NCK2 AC004854.2-201ENST00000608450 1441 ntBASIC24.6■■□□□ 1.53
TRIM43BA6NCK2 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC24.59■■□□□ 1.53
TRIM43BA6NCK2 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
TRIM43BA6NCK2 COX20-201ENST00000366528 568 ntTSL 2 BASIC24.59■■□□□ 1.53
TRIM43BA6NCK2 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
TRIM43BA6NCK2 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC24.59■■□□□ 1.53
TRIM43BA6NCK2 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC24.59■■□□□ 1.53
TRIM43BA6NCK2 TPRG1LP1-201ENST00000598702 760 ntBASIC24.59■■□□□ 1.53
TRIM43BA6NCK2 AC066615.1-201ENST00000640911 628 ntBASIC24.59■■□□□ 1.53
TRIM43BA6NCK2 EI24-204ENST00000527235 1625 ntTSL 5 BASIC24.59■■□□□ 1.53
TRIM43BA6NCK2 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
TRIM43BA6NCK2 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC24.59■■□□□ 1.53
TRIM43BA6NCK2 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
TRIM43BA6NCK2 HLA-L-211ENST00000482052 1765 ntBASIC24.58■■□□□ 1.53
TRIM43BA6NCK2 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
TRIM43BA6NCK2 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC24.58■■□□□ 1.53
TRIM43BA6NCK2 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
TRIM43BA6NCK2 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC24.58■■□□□ 1.53
TRIM43BA6NCK2 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC24.58■■□□□ 1.53
TRIM43BA6NCK2 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
TRIM43BA6NCK2 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
TRIM43BA6NCK2 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC24.57■■□□□ 1.52
TRIM43BA6NCK2 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
TRIM43BA6NCK2 WWOX-218ENST00000627394 894 ntTSL 5 BASIC24.57■■□□□ 1.52
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms